Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL162274.2-201ENST00000614406 332 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ERCC3P19447 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.84□□□□□ -1.8
ERCC3P19447 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.84□□□□□ -1.8
ERCC3P19447 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
ERCC3P19447 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.83□□□□□ -1.8
ERCC3P19447 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.83□□□□□ -1.8
ERCC3P19447 RNU6-1305P-201ENST00000364353 104 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 SNORD32B-201ENST00000364460 84 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ERCC3P19447 RNU4-47P-201ENST00000410876 114 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 RNU2-25P-201ENST00000411041 191 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 AC010401.1-201ENST00000463867 348 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 RN7SL442P-201ENST00000473804 320 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 RPL26P26-201ENST00000480251 434 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 AC025465.3-201ENST00000510570 311 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 AC107222.1-201ENST00000510899 637 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.83□□□□□ -1.8
ERCC3P19447 AC074133.1-201ENST00000515696 183 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 RNA5SP341-201ENST00000516261 117 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 EIF4BP1-201ENST00000554881 351 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.83□□□□□ -1.8
ERCC3P19447 AL355297.2-201ENST00000604792 129 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 AC107871.2-201ENST00000612894 502 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 AC006001.4-201ENST00000622243 395 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC3P19447 AL513302.2-201ENST00000562313 1842 ntBASIC3.83□□□□□ -1.8
ERCC3P19447 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ERCC3P19447 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ERCC3P19447 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC3P19447 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC3P19447 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ERCC3P19447 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC3P19447 AC010615.1-201ENST00000594254 1764 ntBASIC3.82□□□□□ -1.8
ERCC3P19447 Y_RNA.84-201ENST00000363011 104 ntBASIC3.82□□□□□ -1.8
ERCC3P19447 RNU6-1175P-201ENST00000365200 107 ntBASIC3.82□□□□□ -1.8
ERCC3P19447 CBX3P6-201ENST00000430257 527 ntBASIC3.82□□□□□ -1.8
ERCC3P19447 RN7SL283P-201ENST00000489055 303 ntBASIC3.82□□□□□ -1.8
ERCC3P19447 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC3P19447 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.82□□□□□ -1.8
ERCC3P19447 RNU6-344P-201ENST00000516635 111 ntBASIC3.82□□□□□ -1.8
ERCC3P19447 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC3P19447 AC233702.2-202ENST00000562547 291 ntBASIC3.82□□□□□ -1.8
ERCC3P19447 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC3P19447 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERCC3P19447 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERCC3P19447 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
ERCC3P19447 AC138915.1-201ENST00000565427 1685 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RNU1-75P-201ENST00000347264 129 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RNU6-461P-201ENST00000364195 107 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RNA5SP240-201ENST00000365355 128 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RNU6-472P-201ENST00000384299 107 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ERCC3P19447 AL031121.1-201ENST00000406553 254 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RNU2-38P-201ENST00000410856 79 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RNU2-32P-201ENST00000411193 191 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RAB28P5-201ENST00000427490 651 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 UBBP3-201ENST00000445497 241 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 AC080013.2-201ENST00000460866 323 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.81□□□□□ -1.8
ERCC3P19447 SCARNA24.2-201ENST00000516968 130 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RPL17P51-201ENST00000605218 238 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 AC068205.3-201ENST00000636385 468 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ERCC3P19447 MTND5P6-201ENST00000422338 1798 ntBASIC3.81□□□□□ -1.8
ERCC3P19447 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ERCC3P19447 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.81□□□□□ -1.8
ERCC3P19447 snoU2_19.2-201ENST00000363024 80 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 RNU6-220P-201ENST00000390919 107 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 AL357552.1-201ENST00000445254 415 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 RPS29P26-201ENST00000477483 171 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 AC109925.1-201ENST00000478069 331 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 SEPT14P8-201ENST00000508026 178 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 DEFB108E-201ENST00000524692 240 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.8□□□□□ -1.8
ERCC3P19447 AL356280.1-201ENST00000603614 379 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ERCC3P19447 AC135776.4-201ENST00000624300 1904 ntBASIC3.8□□□□□ -1.8
ERCC3P19447 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ERCC3P19447 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
ERCC3P19447 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ERCC3P19447 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ERCC3P19447 MIR30E-201ENST00000362104 92 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 RNU6-545P-201ENST00000362681 104 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 SNORD56.5-201ENST00000364281 72 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 Y_RNA.307-201ENST00000365022 117 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 RNU6-234P-201ENST00000365229 104 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 DYNLT3P1-201ENST00000378574 347 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 RNU6-546P-201ENST00000383991 107 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 Y_RNA.462-201ENST00000384268 102 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 RNU6-1132P-201ENST00000459214 107 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.79□□□□□ -1.8
ERCC3P19447 LARP7P3-201ENST00000579888 337 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 SNORD113-5-201ENST00000607261 78 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 AC004467.1-201ENST00000615678 330 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 MIR6852-201ENST00000621699 66 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 AC006386.2-201ENST00000624491 75 ntBASIC3.79□□□□□ -1.8
ERCC3P19447 AC012005.1-201ENST00000624575 75 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms