Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 HSPE1P19-201ENST00000603327 295 ntBASIC0.87□□□□□ -2.27
CTLA4P16410 AL359821.1-201ENST00000605519 182 ntBASIC0.87□□□□□ -2.27
CTLA4P16410 AC008536.2-201ENST00000607284 349 ntBASIC0.87□□□□□ -2.27
CTLA4P16410 AL359697.1-201ENST00000624879 587 ntBASIC0.87□□□□□ -2.27
CTLA4P16410 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.87□□□□□ -2.27
CTLA4P16410 AC009541.1-201ENST00000438279 2662 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 Y_RNA.159-201ENST00000363674 87 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 SNORA18.2-201ENST00000383865 132 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 RNU6-418P-201ENST00000384035 107 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 MIR1283-1-201ENST00000408494 87 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 CETN4P-201ENST00000432407 469 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.86□□□□□ -2.27
CTLA4P16410 AL031667.1-201ENST00000440222 725 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 snoU13.27-201ENST00000459278 104 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 COX6CP14-201ENST00000469580 174 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 AC010486.2-201ENST00000505572 483 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.86□□□□□ -2.27
CTLA4P16410 RNU7-40P-201ENST00000516397 64 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 RNA5SP384-201ENST00000516615 116 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 MTCO2P4-201ENST00000517968 247 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.86□□□□□ -2.27
CTLA4P16410 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.86□□□□□ -2.27
CTLA4P16410 DEFB131C-201ENST00000528817 165 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.86□□□□□ -2.27
CTLA4P16410 AL391840.1-201ENST00000571144 367 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 SNORA59B-202ENST00000578183 701 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 NIFKP6-201ENST00000598115 845 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 AC126177.8-201ENST00000618339 1015 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 AC091931.1-201ENST00000623488 728 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.86□□□□□ -2.27
CTLA4P16410 BX322639.1-202ENST00000423987 2213 ntBASIC0.86□□□□□ -2.27
CTLA4P16410 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CTLA4P16410 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.85□□□□□ -2.27
CTLA4P16410 RNU6-227P-201ENST00000362865 103 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 RNU6-392P-201ENST00000364926 101 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 RNU6-1065P-201ENST00000384513 106 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.85□□□□□ -2.27
CTLA4P16410 AC090960.1-201ENST00000421072 306 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.85□□□□□ -2.27
CTLA4P16410 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.85□□□□□ -2.27
CTLA4P16410 AL603825.1-201ENST00000438481 80 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 MTND1P27-201ENST00000451117 902 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 RNU6-1037P-201ENST00000459571 107 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 AC091435.1-201ENST00000505442 584 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 RNU6-612P-201ENST00000516909 102 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 RNU6-430P-201ENST00000517078 107 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 RNA5SP404-201ENST00000517118 132 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 AC026470.2-201ENST00000561492 181 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 CYP3A52P-201ENST00000563326 91 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 MIR4498-201ENST00000577599 66 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.85□□□□□ -2.27
CTLA4P16410 MIR5583-1-201ENST00000580941 59 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 AC087683.2-201ENST00000611384 326 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 MIR338-201ENST00000636369 67 ntBASIC0.85□□□□□ -2.27
CTLA4P16410 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CTLA4P16410 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CTLA4P16410 SNORA22-201ENST00000383907 134 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 SNORA22C-201ENST00000384614 134 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 RPS26P42-201ENST00000413485 326 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.84□□□□□ -2.27
CTLA4P16410 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.84□□□□□ -2.27
CTLA4P16410 AL358934.1-201ENST00000432346 324 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.84□□□□□ -2.27
CTLA4P16410 DYNLT3P2-201ENST00000442517 295 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 AC073910.1-201ENST00000445047 438 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 RNU7-63P-201ENST00000459054 62 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 RPS29P27-201ENST00000463711 170 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 ARL2BPP4-201ENST00000506854 471 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CTLA4P16410 RNU6-948P-201ENST00000516374 107 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 RNU6-323P-201ENST00000521915 107 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 MTND4P7-201ENST00000523876 130 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.84□□□□□ -2.27
CTLA4P16410 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.84□□□□□ -2.27
CTLA4P16410 MTATP6P24-201ENST00000576835 677 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 MIR4753-201ENST00000585119 83 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.84□□□□□ -2.27
CTLA4P16410 HULC.1-201ENST00000612720 240 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 AC005562.2-201ENST00000618264 111 ntBASIC0.84□□□□□ -2.27
CTLA4P16410 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.84□□□□□ -2.27
CTLA4P16410 RNU5B-2P-201ENST00000363036 113 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 RNU1-22P-201ENST00000363334 158 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 SNORA72.2-201ENST00000365028 127 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 RNU6-996P-201ENST00000365438 107 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 SNORA29-201ENST00000384183 140 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 RNU6-975P-201ENST00000384296 105 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 RNU6-1235P-201ENST00000384559 107 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 SNORD73A-201ENST00000386062 65 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.83□□□□□ -2.28
CTLA4P16410 MTCYBP8-201ENST00000422855 651 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 AC073415.1-201ENST00000449240 153 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.83□□□□□ -2.28
CTLA4P16410 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.83□□□□□ -2.28
CTLA4P16410 RNU6-498P-201ENST00000459468 107 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.83□□□□□ -2.28
CTLA4P16410 AC005840.1-201ENST00000498412 377 ntBASIC0.83□□□□□ -2.28
CTLA4P16410 AC025465.4-201ENST00000513422 638 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms