Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.34□□□□□ -1.87
PABPC1P11940 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.34□□□□□ -1.87
PABPC1P11940 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PABPC1P11940 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PABPC1P11940 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PABPC1P11940 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.33□□□□□ -1.88
PABPC1P11940 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
PABPC1P11940 Y_RNA.20-201ENST00000362479 113 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 RNA5SP374-201ENST00000362939 125 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 DYNLT3P1-201ENST00000378574 347 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 Y_RNA.515-201ENST00000384535 112 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PABPC1P11940 RPL23AP36-201ENST00000413895 458 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 MICF-203ENST00000432679 129 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 RPL27AP5-201ENST00000469428 449 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 AC140059.1-201ENST00000489238 361 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 RNU2-44P-201ENST00000516795 194 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 SCARNA24.2-201ENST00000516968 130 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.33□□□□□ -1.88
PABPC1P11940 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.33□□□□□ -1.88
PABPC1P11940 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.33□□□□□ -1.88
PABPC1P11940 AC127459.3-201ENST00000624328 466 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 MIR7515-201ENST00000637837 67 ntBASIC3.33□□□□□ -1.88
PABPC1P11940 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PABPC1P11940 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PABPC1P11940 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.33□□□□□ -1.88
PABPC1P11940 AC010329.5-201ENST00000623497 2174 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PABPC1P11940 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PABPC1P11940 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.32□□□□□ -1.88
PABPC1P11940 SNORD27-201ENST00000363981 72 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 RNU6-1310P-201ENST00000384153 107 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 SNORA12-201ENST00000391162 147 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 ELOCP21-201ENST00000412558 336 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.32□□□□□ -1.88
PABPC1P11940 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 RAB28P5-201ENST00000427490 651 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 AC009237.7-201ENST00000447357 229 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 SERF1AP1-201ENST00000514575 187 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 DEFB131C-201ENST00000528817 165 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.32□□□□□ -1.88
PABPC1P11940 AC005000.2-201ENST00000605468 310 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 AC037487.3-201ENST00000606668 112 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 SNORD11B-201ENST00000607707 90 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 AC006001.4-201ENST00000622243 395 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 MIR7157-201ENST00000635801 60 ntBASIC3.32□□□□□ -1.88
PABPC1P11940 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PABPC1P11940 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PABPC1P11940 Y_RNA.286-201ENST00000364813 102 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 RNU6-326P-201ENST00000365480 107 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 Y_RNA.569-201ENST00000384749 103 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PABPC1P11940 AL603910.2-201ENST00000407268 136 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 AC004866.1-201ENST00000411748 78 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 Z92545.1-201ENST00000411782 234 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.31□□□□□ -1.88
PABPC1P11940 MIR2276-201ENST00000516886 89 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.31□□□□□ -1.88
PABPC1P11940 AC000403.1-201ENST00000613696 3585 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PABPC1P11940 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PABPC1P11940 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PABPC1P11940 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.31□□□□□ -1.88
PABPC1P11940 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PABPC1P11940 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PABPC1P11940 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.3□□□□□ -1.88
PABPC1P11940 Y_RNA.54-201ENST00000362766 105 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 SNORD32B-201ENST00000364460 84 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 Y_RNA.331-201ENST00000365267 102 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 Y_RNA.415-201ENST00000384012 112 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 SNORA48.2-201ENST00000390926 124 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 AL353705.1-201ENST00000433468 480 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.3□□□□□ -1.88
PABPC1P11940 HMGB3P17-201ENST00000504195 649 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.3□□□□□ -1.88
PABPC1P11940 RNU2-31P-201ENST00000516954 155 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 RNU6-111P-201ENST00000517179 105 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.3□□□□□ -1.88
PABPC1P11940 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
PABPC1P11940 AC010900.2-201ENST00000604508 210 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 AC022441.3-201ENST00000605737 136 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 AC068205.3-201ENST00000636385 468 ntBASIC3.3□□□□□ -1.88
PABPC1P11940 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PABPC1P11940 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PABPC1P11940 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
PABPC1P11940 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PABPC1P11940 RNU6-1266P-201ENST00000362794 105 ntBASIC3.29□□□□□ -1.88
PABPC1P11940 SNORA68.1-201ENST00000364537 132 ntBASIC3.29□□□□□ -1.88
PABPC1P11940 MIR128-1-201ENST00000384921 82 ntBASIC3.29□□□□□ -1.88
PABPC1P11940 U6atac.2-201ENST00000408644 118 ntBASIC3.29□□□□□ -1.88
PABPC1P11940 Y_RNA.597-201ENST00000410463 100 ntBASIC3.29□□□□□ -1.88
PABPC1P11940 RNA5SP475-201ENST00000410568 110 ntBASIC3.29□□□□□ -1.88
PABPC1P11940 RNU6-1328P-201ENST00000410938 106 ntBASIC3.29□□□□□ -1.88
PABPC1P11940 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.29□□□□□ -1.88
PABPC1P11940 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.29□□□□□ -1.88
PABPC1P11940 RPL30P4-201ENST00000429309 333 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms