Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.14□□□□□ -2.39
CXCL1P09341 AK3P2-201ENST00000507976 429 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 LRRC34P2-201ENST00000514850 553 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 SNORA68.3-201ENST00000515906 83 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-496P-201ENST00000516145 99 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU1-142P-201ENST00000516682 145 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 DEFB131C-201ENST00000528817 165 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.14□□□□□ -2.39
CXCL1P09341 AC016256.1-201ENST00000547971 354 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.14□□□□□ -2.39
CXCL1P09341 AC004584.2-201ENST00000570407 410 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-6P-201ENST00000606623 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 AP000484.1-201ENST00000620067 1252 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.14□□□□□ -2.39
CXCL1P09341 AL359757.2-201ENST00000624309 274 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.14□□□□□ -2.39
CXCL1P09341 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CXCL1P09341 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-1067P-201ENST00000384752 107 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 MRPL42P3-201ENST00000401492 326 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 AL355796.1-201ENST00000406706 323 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 MIR548J-201ENST00000408833 112 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 MTATP6P20-201ENST00000414147 562 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 AC012306.1-201ENST00000423267 114 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.13□□□□□ -2.39
CXCL1P09341 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.13□□□□□ -2.39
CXCL1P09341 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.13□□□□□ -2.39
CXCL1P09341 AC104136.1-201ENST00000512969 394 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 RNU6-237P-201ENST00000515985 71 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 RNU6-917P-201ENST00000516294 104 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 RNU6-1110P-201ENST00000516462 101 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.13□□□□□ -2.39
CXCL1P09341 AC092354.1-201ENST00000606057 376 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 AL391903.3-201ENST00000612158 163 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 AC008250.2-201ENST00000615261 205 ntBASIC0.13□□□□□ -2.39
CXCL1P09341 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.13□□□□□ -2.39
CXCL1P09341 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CXCL1P09341 RNU6-428P-201ENST00000362942 107 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 Y_RNA.191-201ENST00000363972 113 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 RNU6-39P-201ENST00000384344 107 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 RNU6-45P-201ENST00000384471 107 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 RNU6-342P-201ENST00000384521 104 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 MTND3P17-201ENST00000416968 344 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.12□□□□□ -2.39
CXCL1P09341 AC244098.3-201ENST00000424803 96 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 RPS24P1-201ENST00000438550 371 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 MTCO2P7-201ENST00000446518 666 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 AC016717.1-201ENST00000448918 286 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.12□□□□□ -2.39
CXCL1P09341 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.12□□□□□ -2.39
CXCL1P09341 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.12□□□□□ -2.39
CXCL1P09341 AC010486.2-201ENST00000505572 483 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CXCL1P09341 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.12□□□□□ -2.39
CXCL1P09341 AC004223.2-201ENST00000590309 544 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 AC004832.4-201ENST00000608952 331 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 AL359075.3-201ENST00000613288 217 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 MIR6504-201ENST00000613520 61 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 MIR6513-201ENST00000621188 64 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 MTND5P16-201ENST00000460269 1703 ntBASIC0.12□□□□□ -2.39
CXCL1P09341 RNU4-1-201ENST00000363925 141 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 SNORD115.1-201ENST00000391109 76 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 MIR1253-201ENST00000408273 105 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AL117339.3-201ENST00000418733 162 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AC090960.1-201ENST00000421072 306 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AC245047.3-201ENST00000429428 127 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 RPL23AP50-201ENST00000434149 455 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 DAP3P1-201ENST00000441522 278 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AL031313.1-201ENST00000448435 256 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AC079382.1-201ENST00000493346 557 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.11□□□□□ -2.39
CXCL1P09341 RNU6-1069P-201ENST00000516612 133 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AC027419.1-201ENST00000522976 328 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AP002001.1-203ENST00000534002 267 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.11□□□□□ -2.39
CXCL1P09341 SUB1P2-201ENST00000556401 297 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 MIR4298-201ENST00000584380 73 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.11□□□□□ -2.39
CXCL1P09341 AC013244.3-201ENST00000605614 388 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AC017083.3-201ENST00000609955 700 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 SNORA43.4-201ENST00000629559 138 ntBASIC0.11□□□□□ -2.39
CXCL1P09341 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.11□□□□□ -2.39
CXCL1P09341 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 Y_RNA.504-201ENST00000384481 104 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 MIR549A-201ENST00000385268 96 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 AL354692.1-201ENST00000423044 315 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.1□□□□□ -2.39
CXCL1P09341 RPL22P17-201ENST00000438729 315 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 EEF1A1P39-201ENST00000440791 250 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 AC074290.1-201ENST00000448883 135 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 MTND4LP26-201ENST00000518144 282 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 AC026470.2-201ENST00000561492 181 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 MIR4711-201ENST00000578274 70 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 Z99497.2-201ENST00000603634 310 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 AC005562.2-201ENST00000618264 111 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 AC006001.4-201ENST00000622243 395 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 AC019226.2-201ENST00000625973 424 ntBASIC0.1□□□□□ -2.39
CXCL1P09341 SNORA36A-201ENST00000384221 132 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms