Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL162725.1-201ENST00000435405 301 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 SNORD111.1-201ENST00000516421 86 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 RNA5SP461-201ENST00000516451 104 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.25□□□□□ -2.45
SPTA1P02549 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.25□□□□□ -2.45
SPTA1P02549 MIR1273C-201ENST00000578669 77 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 AC005332.6-201ENST00000613178 446 ntBASIC-0.25□□□□□ -2.45
SPTA1P02549 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.25□□□□□ -2.45
SPTA1P02549 BX322639.1-202ENST00000423987 2213 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 RNU6-658P-201ENST00000384606 106 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
SPTA1P02549 RAP1BP3-201ENST00000407180 549 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 RNU6-735P-201ENST00000410612 107 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 AC019178.2-201ENST00000423595 505 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 BTF3P11-201ENST00000426582 477 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 RPS29P15-201ENST00000458329 171 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.26□□□□□ -2.45
SPTA1P02549 snoU109.2-201ENST00000459316 135 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 MTCO3P28-201ENST00000513351 515 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 LRRC6P1-201ENST00000532188 885 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 AC090502.2-201ENST00000549267 280 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.26□□□□□ -2.45
SPTA1P02549 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.26□□□□□ -2.45
SPTA1P02549 AC021231.3-201ENST00000558497 370 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 AC004584.2-201ENST00000570407 410 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 MIR3923-201ENST00000579521 83 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 AC018462.2-201ENST00000605375 395 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.26□□□□□ -2.45
SPTA1P02549 AC106754.2-201ENST00000623006 233 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.26□□□□□ -2.45
SPTA1P02549 SNORD114-11-201ENST00000363738 75 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 MIR653-201ENST00000385279 96 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 SNORA40.8-201ENST00000411034 126 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
SPTA1P02549 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 SCARNA17-201ENST00000516183 144 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.26□□□□□ -2.45
SPTA1P02549 TPRKBP2-201ENST00000565969 475 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.26□□□□□ -2.45
SPTA1P02549 AC022217.4-201ENST00000604389 163 ntBASIC-0.26□□□□□ -2.45
SPTA1P02549 RNU6-78P-201ENST00000362897 107 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RNU4-56P-201ENST00000364700 142 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 SNORA75B-201ENST00000384053 137 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RNA5SP323-201ENST00000391094 133 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RNA5SP300-201ENST00000391197 107 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 MIR1827-201ENST00000408549 66 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPTA1P02549 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPTA1P02549 AC022364.2-201ENST00000457963 554 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AC016925.1-201ENST00000458303 298 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AC010531.2-201ENST00000465012 153 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPTA1P02549 AC074133.1-201ENST00000515696 183 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RNU1-86P-201ENST00000516108 154 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RNU1-107P-201ENST00000516617 154 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPTA1P02549 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPTA1P02549 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
SPTA1P02549 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPTA1P02549 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.27□□□□□ -2.45
SPTA1P02549 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AC083799.1-201ENST00000366451 910 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RNU6-142P-201ENST00000384019 107 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 MIR593-201ENST00000384856 100 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AL590084.2-201ENST00000401481 382 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
SPTA1P02549 ELOCP24-201ENST00000456370 334 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 HMGB1P28-201ENST00000507778 552 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.27□□□□□ -2.45
SPTA1P02549 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPTA1P02549 AC027419.1-201ENST00000522976 328 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AC027288.2-201ENST00000553028 243 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AC087685.1-201ENST00000587507 141 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AL162424.1-201ENST00000602325 221 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 AC064807.4-201ENST00000607201 407 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RN7SL660P-201ENST00000614852 299 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 uc_338.16-201ENST00000621804 95 ntBASIC-0.27□□□□□ -2.45
SPTA1P02549 RNU6-28P-201ENST00000362378 107 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.28□□□□□ -2.45
SPTA1P02549 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 MIR548H2-201ENST00000408874 88 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 RNU6-564P-201ENST00000410983 104 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AL590632.1-201ENST00000424289 371 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AL035398.1-201ENST00000430869 322 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AC002486.1-201ENST00000435098 391 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AC243964.1-201ENST00000441814 261 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms