Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.45□□□□□ -2.02
LDLRP01130 RPL9P9-202ENST00000466501 579 ntBASIC2.45□□□□□ -2.02
LDLRP01130 Y_RNA.680-201ENST00000516441 93 ntBASIC2.45□□□□□ -2.02
LDLRP01130 RNU6-388P-201ENST00000517012 105 ntBASIC2.45□□□□□ -2.02
LDLRP01130 RNU6-389P-201ENST00000517048 105 ntBASIC2.45□□□□□ -2.02
LDLRP01130 AC109329.2-201ENST00000519658 482 ntBASIC2.45□□□□□ -2.02
LDLRP01130 AC131281.1-201ENST00000522984 164 ntBASIC2.45□□□□□ -2.02
LDLRP01130 IGKV3-31-201ENST00000523109 329 ntBASIC2.45□□□□□ -2.02
LDLRP01130 CBX3P8-201ENST00000532412 525 ntBASIC2.45□□□□□ -2.02
LDLRP01130 AC105137.2-201ENST00000569073 466 ntBASIC2.45□□□□□ -2.02
LDLRP01130 AC090897.2-201ENST00000581715 130 ntBASIC2.45□□□□□ -2.02
LDLRP01130 MIR5188-201ENST00000583467 113 ntBASIC2.45□□□□□ -2.02
LDLRP01130 MIR3616-201ENST00000584070 92 ntBASIC2.45□□□□□ -2.02
LDLRP01130 AL355297.3-201ENST00000604082 446 ntBASIC2.45□□□□□ -2.02
LDLRP01130 RNU6-91P-201ENST00000607774 107 ntBASIC2.45□□□□□ -2.02
LDLRP01130 U2.1-201ENST00000618978 145 ntBASIC2.45□□□□□ -2.02
LDLRP01130 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.45□□□□□ -2.02
LDLRP01130 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.45□□□□□ -2.02
LDLRP01130 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LDLRP01130 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LDLRP01130 AC080128.1-201ENST00000474389 1917 ntBASIC2.44□□□□□ -2.02
LDLRP01130 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.44□□□□□ -2.02
LDLRP01130 Y_RNA.26-201ENST00000362539 101 ntBASIC2.44□□□□□ -2.02
LDLRP01130 Y_RNA.39-201ENST00000362620 98 ntBASIC2.44□□□□□ -2.02
LDLRP01130 RNU6-212P-201ENST00000362642 104 ntBASIC2.44□□□□□ -2.02
LDLRP01130 Y_RNA.210-201ENST00000364161 110 ntBASIC2.44□□□□□ -2.02
LDLRP01130 U3.13-201ENST00000364804 214 ntBASIC2.44□□□□□ -2.02
LDLRP01130 RNU6-487P-201ENST00000365430 104 ntBASIC2.44□□□□□ -2.02
LDLRP01130 Y_RNA.380-201ENST00000365663 111 ntBASIC2.44□□□□□ -2.02
LDLRP01130 RNU1-138P-201ENST00000384093 164 ntBASIC2.44□□□□□ -2.02
LDLRP01130 MIR1252-201ENST00000408861 65 ntBASIC2.44□□□□□ -2.02
LDLRP01130 RNA5SP390-201ENST00000410191 113 ntBASIC2.44□□□□□ -2.02
LDLRP01130 AC007064.1-201ENST00000412238 351 ntBASIC2.44□□□□□ -2.02
LDLRP01130 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.44□□□□□ -2.02
LDLRP01130 AC097463.2-201ENST00000421074 142 ntBASIC2.44□□□□□ -2.02
LDLRP01130 AL353997.1-201ENST00000432936 108 ntBASIC2.44□□□□□ -2.02
LDLRP01130 DYNLT3P2-201ENST00000442517 295 ntBASIC2.44□□□□□ -2.02
LDLRP01130 RPL39P29-201ENST00000447779 157 ntBASIC2.44□□□□□ -2.02
LDLRP01130 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.44□□□□□ -2.02
LDLRP01130 RNU7-26P-201ENST00000458980 63 ntBASIC2.44□□□□□ -2.02
LDLRP01130 FO393415.2-201ENST00000480085 343 ntBASIC2.44□□□□□ -2.02
LDLRP01130 RPL17P19-201ENST00000489069 552 ntBASIC2.44□□□□□ -2.02
LDLRP01130 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.44□□□□□ -2.02
LDLRP01130 RNU6-408P-201ENST00000515910 100 ntBASIC2.44□□□□□ -2.02
LDLRP01130 RNU6-307P-201ENST00000516743 106 ntBASIC2.44□□□□□ -2.02
LDLRP01130 RNA5SP402-201ENST00000517148 110 ntBASIC2.44□□□□□ -2.02
LDLRP01130 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.44□□□□□ -2.02
LDLRP01130 AC022616.4-201ENST00000522985 181 ntBASIC2.44□□□□□ -2.02
LDLRP01130 DEFB122-202ENST00000569013 197 ntBASIC2.44□□□□□ -2.02
LDLRP01130 MIR3976-201ENST00000606807 139 ntBASIC2.44□□□□□ -2.02
LDLRP01130 AC062037.2-201ENST00000610137 73 ntBASIC2.44□□□□□ -2.02
LDLRP01130 MIR8062-201ENST00000621515 85 ntBASIC2.44□□□□□ -2.02
LDLRP01130 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.44□□□□□ -2.02
LDLRP01130 CTSLP2-204ENST00000629029 392 ntBASIC2.44□□□□□ -2.02
LDLRP01130 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LDLRP01130 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LDLRP01130 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LDLRP01130 AP006437.1-201ENST00000641440 3685 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LDLRP01130 RNU6-529P-201ENST00000363383 104 ntBASIC2.43□□□□□ -2.02
LDLRP01130 Y_RNA.214-201ENST00000364201 112 ntBASIC2.43□□□□□ -2.02
LDLRP01130 RNU4-42P-201ENST00000364738 142 ntBASIC2.43□□□□□ -2.02
LDLRP01130 Y_RNA.314-201ENST00000365114 102 ntBASIC2.43□□□□□ -2.02
LDLRP01130 U8.8-201ENST00000365399 135 ntBASIC2.43□□□□□ -2.02
LDLRP01130 RNU6-790P-201ENST00000384479 105 ntBASIC2.43□□□□□ -2.02
LDLRP01130 Y_RNA.556-201ENST00000384677 113 ntBASIC2.43□□□□□ -2.02
LDLRP01130 Y_RNA.577-201ENST00000384794 101 ntBASIC2.43□□□□□ -2.02
LDLRP01130 RNU6-1156P-201ENST00000410365 100 ntBASIC2.43□□□□□ -2.02
LDLRP01130 MTND3P9-201ENST00000429526 346 ntBASIC2.43□□□□□ -2.02
LDLRP01130 CR769767.1-201ENST00000436337 346 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AL603825.1-201ENST00000438481 80 ntBASIC2.43□□□□□ -2.02
LDLRP01130 Z98949.2-201ENST00000440996 144 ntBASIC2.43□□□□□ -2.02
LDLRP01130 IFNA11P-201ENST00000446352 526 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.43□□□□□ -2.02
LDLRP01130 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.43□□□□□ -2.02
LDLRP01130 AC104564.1-201ENST00000493028 407 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AC114801.2-201ENST00000503825 781 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AC107222.1-201ENST00000510899 637 ntBASIC2.43□□□□□ -2.02
LDLRP01130 MTND1P19-201ENST00000511780 315 ntBASIC2.43□□□□□ -2.02
LDLRP01130 RNA5SP112-201ENST00000515937 99 ntBASIC2.43□□□□□ -2.02
LDLRP01130 Y_RNA.676-201ENST00000516393 96 ntBASIC2.43□□□□□ -2.02
LDLRP01130 RNU6-612P-201ENST00000516909 102 ntBASIC2.43□□□□□ -2.02
LDLRP01130 Y_RNA.715-201ENST00000517082 110 ntBASIC2.43□□□□□ -2.02
LDLRP01130 CKS1BP7-201ENST00000522230 235 ntBASIC2.43□□□□□ -2.02
LDLRP01130 HSBP1P1-201ENST00000555205 166 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AC027176.1-201ENST00000560204 514 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AC005357.1-201ENST00000588399 301 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AL356280.1-201ENST00000603614 379 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AL137847.3-201ENST00000611521 109 ntBASIC2.43□□□□□ -2.02
LDLRP01130 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.43□□□□□ -2.02
LDLRP01130 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LDLRP01130 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LDLRP01130 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LDLRP01130 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
LDLRP01130 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
LDLRP01130 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.42□□□□□ -2.02
LDLRP01130 RNU6-806P-201ENST00000365147 105 ntBASIC2.42□□□□□ -2.02
LDLRP01130 SNORD14.1-201ENST00000365609 90 ntBASIC2.42□□□□□ -2.02
LDLRP01130 Y_RNA.424-201ENST00000384063 103 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms