Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SNORA11.4-201ENST00000408823 129 ntBASIC2.31□□□□□ -2.04
RTN3O95197 RNU6-174P-201ENST00000410406 106 ntBASIC2.31□□□□□ -2.04
RTN3O95197 AC027124.2-201ENST00000428249 105 ntBASIC2.31□□□□□ -2.04
RTN3O95197 USP9YP30-201ENST00000430729 455 ntBASIC2.31□□□□□ -2.04
RTN3O95197 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.31□□□□□ -2.04
RTN3O95197 AL035666.1-201ENST00000446195 348 ntBASIC2.31□□□□□ -2.04
RTN3O95197 snoU13.23-201ENST00000458863 104 ntBASIC2.31□□□□□ -2.04
RTN3O95197 AC007215.1-201ENST00000464893 276 ntBASIC2.31□□□□□ -2.04
RTN3O95197 AC104435.1-201ENST00000483483 166 ntBASIC2.31□□□□□ -2.04
RTN3O95197 RNU6-1016P-201ENST00000516689 94 ntBASIC2.31□□□□□ -2.04
RTN3O95197 RNU7-30P-201ENST00000516835 62 ntBASIC2.31□□□□□ -2.04
RTN3O95197 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.31□□□□□ -2.04
RTN3O95197 7SK.7-201ENST00000603504 247 ntBASIC2.31□□□□□ -2.04
RTN3O95197 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.31□□□□□ -2.04
RTN3O95197 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.31□□□□□ -2.04
RTN3O95197 AC092881.1-201ENST00000638218 2733 ntBASIC2.3□□□□□ -2.04
RTN3O95197 SNORD115-32-201ENST00000364079 82 ntBASIC2.3□□□□□ -2.04
RTN3O95197 RNU6-1164P-201ENST00000364428 107 ntBASIC2.3□□□□□ -2.04
RTN3O95197 SNORD31B-201ENST00000364977 69 ntBASIC2.3□□□□□ -2.04
RTN3O95197 AC123900.1-201ENST00000420390 96 ntBASIC2.3□□□□□ -2.04
RTN3O95197 RPS3AP52-201ENST00000435639 297 ntBASIC2.3□□□□□ -2.04
RTN3O95197 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.3□□□□□ -2.04
RTN3O95197 TOMM22P6-201ENST00000465035 409 ntBASIC2.3□□□□□ -2.04
RTN3O95197 FO393415.2-201ENST00000480085 343 ntBASIC2.3□□□□□ -2.04
RTN3O95197 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
RTN3O95197 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.3□□□□□ -2.04
RTN3O95197 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.3□□□□□ -2.04
RTN3O95197 ANP32BP3-201ENST00000559213 706 ntBASIC2.3□□□□□ -2.04
RTN3O95197 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.3□□□□□ -2.04
RTN3O95197 MIR5696-201ENST00000578474 85 ntBASIC2.3□□□□□ -2.04
RTN3O95197 uc_338.5-201ENST00000611839 155 ntBASIC2.3□□□□□ -2.04
RTN3O95197 AC098657.3-201ENST00000620434 263 ntBASIC2.3□□□□□ -2.04
RTN3O95197 DUXAP9-208ENST00000622815 614 ntBASIC2.3□□□□□ -2.04
RTN3O95197 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.3□□□□□ -2.04
RTN3O95197 AC099654.14-201ENST00000638599 341 ntBASIC2.3□□□□□ -2.04
RTN3O95197 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.3□□□□□ -2.04
RTN3O95197 MTND4P1-201ENST00000457501 1466 ntBASIC2.3□□□□□ -2.04
RTN3O95197 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RTN3O95197 AL359851.1-201ENST00000569460 4997 ntBASIC2.29□□□□□ -2.04
RTN3O95197 RNU1-58P-201ENST00000362413 163 ntBASIC2.29□□□□□ -2.04
RTN3O95197 MIR764-201ENST00000390811 85 ntBASIC2.29□□□□□ -2.04
RTN3O95197 MIR320B2-201ENST00000408479 138 ntBASIC2.29□□□□□ -2.04
RTN3O95197 RNA5SP450-201ENST00000411206 102 ntBASIC2.29□□□□□ -2.04
RTN3O95197 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.29□□□□□ -2.04
RTN3O95197 BX510359.4-201ENST00000423750 193 ntBASIC2.29□□□□□ -2.04
RTN3O95197 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.29□□□□□ -2.04
RTN3O95197 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.29□□□□□ -2.04
RTN3O95197 PMCHL2-203ENST00000457791 237 ntBASIC2.29□□□□□ -2.04
RTN3O95197 Y_RNA.676-201ENST00000516393 96 ntBASIC2.29□□□□□ -2.04
RTN3O95197 RNU2-44P-201ENST00000516795 194 ntBASIC2.29□□□□□ -2.04
RTN3O95197 DEFB131C-201ENST00000528817 165 ntBASIC2.29□□□□□ -2.04
RTN3O95197 AC010928.2-201ENST00000588017 287 ntBASIC2.29□□□□□ -2.04
RTN3O95197 SNRPGP20-201ENST00000604477 205 ntBASIC2.29□□□□□ -2.04
RTN3O95197 AC018462.2-201ENST00000605375 395 ntBASIC2.29□□□□□ -2.04
RTN3O95197 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.29□□□□□ -2.04
RTN3O95197 RMST_6.1-201ENST00000611980 203 ntBASIC2.29□□□□□ -2.04
RTN3O95197 TCL6_2.1-201ENST00000615162 119 ntBASIC2.29□□□□□ -2.04
RTN3O95197 AC130454.1-201ENST00000622948 401 ntBASIC2.29□□□□□ -2.04
RTN3O95197 AL359697.1-201ENST00000624879 587 ntBASIC2.29□□□□□ -2.04
RTN3O95197 CENPCP1-201ENST00000533085 2578 ntBASIC2.29□□□□□ -2.04
RTN3O95197 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
RTN3O95197 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
RTN3O95197 RNU6-1059P-201ENST00000363752 98 ntBASIC2.28□□□□□ -2.04
RTN3O95197 Y_RNA.339-201ENST00000365325 102 ntBASIC2.28□□□□□ -2.04
RTN3O95197 U8.10-201ENST00000384260 133 ntBASIC2.28□□□□□ -2.04
RTN3O95197 MIR1283-2-201ENST00000408621 87 ntBASIC2.28□□□□□ -2.04
RTN3O95197 RNU2-40P-201ENST00000410833 196 ntBASIC2.28□□□□□ -2.04
RTN3O95197 RPL37P10-201ENST00000412884 288 ntBASIC2.28□□□□□ -2.04
RTN3O95197 AC243428.1-201ENST00000421099 264 ntBASIC2.28□□□□□ -2.04
RTN3O95197 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.28□□□□□ -2.04
RTN3O95197 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.28□□□□□ -2.04
RTN3O95197 snoU13.30-201ENST00000458951 104 ntBASIC2.28□□□□□ -2.04
RTN3O95197 RNU6-1198P-201ENST00000516904 67 ntBASIC2.28□□□□□ -2.04
RTN3O95197 RNA5SP54-201ENST00000516951 92 ntBASIC2.28□□□□□ -2.04
RTN3O95197 IGKV3-31-201ENST00000523109 329 ntBASIC2.28□□□□□ -2.04
RTN3O95197 AC087441.2-201ENST00000529141 262 ntBASIC2.28□□□□□ -2.04
RTN3O95197 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.28□□□□□ -2.04
RTN3O95197 AC015712.3-201ENST00000559380 164 ntBASIC2.28□□□□□ -2.04
RTN3O95197 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.28□□□□□ -2.04
RTN3O95197 AC022306.2-201ENST00000617563 647 ntBASIC2.28□□□□□ -2.04
RTN3O95197 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
RTN3O95197 ZNF299P-201ENST00000406845 1804 ntBASIC2.28□□□□□ -2.04
RTN3O95197 LINC02555-201ENST00000563933 1951 ntBASIC2.27□□□□□ -2.05
RTN3O95197 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RTN3O95197 RNU6-842P-201ENST00000384269 107 ntBASIC2.27□□□□□ -2.05
RTN3O95197 Y_RNA.490-201ENST00000384413 102 ntBASIC2.27□□□□□ -2.05
RTN3O95197 MIR32-201ENST00000384965 70 ntBASIC2.27□□□□□ -2.05
RTN3O95197 MIR153-2-201ENST00000385225 87 ntBASIC2.27□□□□□ -2.05
RTN3O95197 MIR1289-2-201ENST00000408360 111 ntBASIC2.27□□□□□ -2.05
RTN3O95197 RNA5SP338-201ENST00000410495 85 ntBASIC2.27□□□□□ -2.05
RTN3O95197 AL591806.2-201ENST00000433122 173 ntBASIC2.27□□□□□ -2.05
RTN3O95197 Z82188.1-201ENST00000436709 154 ntBASIC2.27□□□□□ -2.05
RTN3O95197 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.27□□□□□ -2.05
RTN3O95197 AC004386.2-201ENST00000441858 148 ntBASIC2.27□□□□□ -2.05
RTN3O95197 AC016925.1-201ENST00000458303 298 ntBASIC2.27□□□□□ -2.05
RTN3O95197 AC108210.2-201ENST00000503681 201 ntBASIC2.27□□□□□ -2.05
RTN3O95197 AC026782.1-201ENST00000512952 449 ntBASIC2.27□□□□□ -2.05
RTN3O95197 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.27□□□□□ -2.05
RTN3O95197 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.27□□□□□ -2.05
RTN3O95197 DEFB122-202ENST00000569013 197 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms