Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TRAV28-201ENST00000557548 323 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 MIR8076-201ENST00000611401 83 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 AC004852.3-201ENST00000614131 326 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 U4.1-201ENST00000620349 87 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 SCARNA4-202ENST00000625402 129 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 U2.21-201ENST00000637295 81 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CACNA1FO60840 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.27□□□□□ -2.05
CACNA1FO60840 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.27□□□□□ -2.05
CACNA1FO60840 Y_RNA.144-201ENST00000363521 113 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 Y_RNA.176-201ENST00000363815 109 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 RNU6-450P-201ENST00000364654 107 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 RNU6-384P-201ENST00000364900 104 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 RNU6-827P-201ENST00000365553 106 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 Y_RNA.455-201ENST00000384230 98 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 RPL23AP58-201ENST00000440453 469 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 DYNLT3P2-201ENST00000442517 295 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 AC013470.1-201ENST00000453438 462 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 AC139453.3-201ENST00000493276 369 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.27□□□□□ -2.05
CACNA1FO60840 MYL12BP1-201ENST00000569826 507 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 AC125232.2-201ENST00000592457 143 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 MTND4LP5-201ENST00000605152 292 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.27□□□□□ -2.05
CACNA1FO60840 MIR1244-1-201ENST00000612829 85 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 AC138627.2-201ENST00000624202 601 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 AC138305.3-201ENST00000624988 240 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 MIR1244-3-201ENST00000635744 85 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 MIR1244-2-201ENST00000636449 85 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 MIR1244-4-202ENST00000636813 85 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CACNA1FO60840 AC091812.1-201ENST00000432235 1948 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 ZNF299P-201ENST00000406845 1804 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 RNU6-238P-201ENST00000363313 106 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 RNU6-596P-201ENST00000365395 98 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 RNU6-823P-201ENST00000391042 103 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 RN7SKP101-201ENST00000411376 320 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.26□□□□□ -2.05
CACNA1FO60840 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.26□□□□□ -2.05
CACNA1FO60840 MTATP6P7-201ENST00000453315 681 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 snoU109.2-201ENST00000459316 135 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 AC068781.1-201ENST00000488231 618 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 AC022493.2-201ENST00000506122 481 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 Y_RNA.687-201ENST00000516558 91 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.26□□□□□ -2.05
CACNA1FO60840 7SK.7-201ENST00000603504 247 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 MIR3976-201ENST00000606807 139 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 SDR42E1P4-201ENST00000620894 481 ntBASIC2.26□□□□□ -2.05
CACNA1FO60840 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CACNA1FO60840 Y_RNA.401-201ENST00000383965 117 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 RNU6-198P-201ENST00000384258 104 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 RNU6-463P-201ENST00000384340 107 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.25□□□□□ -2.05
CACNA1FO60840 FO393413.1-201ENST00000402892 195 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 AL513475.1-201ENST00000406602 315 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 AC012308.1-201ENST00000451232 178 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.25□□□□□ -2.05
CACNA1FO60840 RNA5SP182-201ENST00000516064 82 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 SNORA40.14-201ENST00000516543 86 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 SNORA31.18-201ENST00000517043 134 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 RNU6-1271P-201ENST00000517049 105 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.25□□□□□ -2.05
CACNA1FO60840 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.25□□□□□ -2.05
CACNA1FO60840 AL021879.1-201ENST00000611756 288 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 AC084768.2-201ENST00000622736 221 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CACNA1FO60840 RNU6-858P-201ENST00000362436 107 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 SNORD14.1-201ENST00000365609 90 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 Y_RNA.471-201ENST00000384312 102 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 RNU6-140P-201ENST00000384566 108 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 RNU6-1105P-201ENST00000384774 107 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 MIR518D-201ENST00000385014 87 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 MIR10A-201ENST00000385043 110 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 MIR548F4-201ENST00000408515 105 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 Y_RNA.618-201ENST00000410949 107 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 RPS15AP7-201ENST00000439294 405 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.25□□□□□ -2.05
CACNA1FO60840 OSTCP8-201ENST00000445117 448 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.25□□□□□ -2.05
CACNA1FO60840 AL583843.1-201ENST00000456070 346 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 RNU7-169P-201ENST00000459456 61 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 RPS29P27-201ENST00000463711 170 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 Y_RNA.720-201ENST00000517166 92 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.25□□□□□ -2.05
CACNA1FO60840 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.25□□□□□ -2.05
CACNA1FO60840 AC018889.1-201ENST00000605372 397 ntBASIC2.25□□□□□ -2.05
CACNA1FO60840 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CACNA1FO60840 AC131280.1-202ENST00000624067 4211 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 RNU6-78P-201ENST00000362897 107 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 Y_RNA.210-201ENST00000364161 110 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 SET-203ENST00000372688 801 ntTSL 2 BASIC2.24□□□□□ -2.05
CACNA1FO60840 MIR1302-3-201ENST00000408128 138 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 RNA5SP489-201ENST00000410986 109 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 RPL21P38-201ENST00000418090 167 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.24□□□□□ -2.05
CACNA1FO60840 PIGFP3-201ENST00000441918 722 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 AC093852.1-201ENST00000503587 266 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 RNU6-377P-201ENST00000515965 102 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms