Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.09□□□□□ -1.91
KDM1AO60341 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.09□□□□□ -1.91
KDM1AO60341 HSPE1P18-201ENST00000517602 280 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 DEFB131C-201ENST00000528817 165 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.09□□□□□ -1.91
KDM1AO60341 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.09□□□□□ -1.91
KDM1AO60341 MZT1P2-201ENST00000604387 248 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 AL357075.2-201ENST00000614906 189 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 TCL6_2.1-201ENST00000615162 119 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.09□□□□□ -1.91
KDM1AO60341 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KDM1AO60341 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KDM1AO60341 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.09□□□□□ -1.92
KDM1AO60341 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KDM1AO60341 AC080128.1-201ENST00000474389 1917 ntBASIC3.09□□□□□ -1.92
KDM1AO60341 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KDM1AO60341 SNORD32B-201ENST00000364460 84 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 Y_RNA.288-201ENST00000364854 92 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 SNORA18.2-201ENST00000383865 132 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 Y_RNA.483-201ENST00000384380 101 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.08□□□□□ -1.92
KDM1AO60341 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.08□□□□□ -1.92
KDM1AO60341 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.08□□□□□ -1.92
KDM1AO60341 IFNA11P-201ENST00000446352 526 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 UQCRBP2-201ENST00000447827 297 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.08□□□□□ -1.92
KDM1AO60341 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.08□□□□□ -1.92
KDM1AO60341 MIR2682-201ENST00000580305 110 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 AL713866.2-201ENST00000603579 219 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 AC069294.1-201ENST00000608397 350 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 MIR7112-201ENST00000616126 65 ntBASIC3.08□□□□□ -1.92
KDM1AO60341 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.08□□□□□ -1.92
KDM1AO60341 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
KDM1AO60341 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
KDM1AO60341 AC009487.2-201ENST00000420969 6821 ntBASIC3.07□□□□□ -1.92
KDM1AO60341 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KDM1AO60341 SNORA7.4-201ENST00000384249 137 ntBASIC3.07□□□□□ -1.92
KDM1AO60341 RNU6-937P-201ENST00000384325 106 ntBASIC3.07□□□□□ -1.92
KDM1AO60341 RNU6-1274P-201ENST00000384557 107 ntBASIC3.07□□□□□ -1.92
KDM1AO60341 MT-TW-201ENST00000387382 68 ntBASIC3.07□□□□□ -1.92
KDM1AO60341 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.07□□□□□ -1.92
KDM1AO60341 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.07□□□□□ -1.92
KDM1AO60341 AC004386.2-201ENST00000441858 148 ntBASIC3.07□□□□□ -1.92
KDM1AO60341 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.07□□□□□ -1.92
KDM1AO60341 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
KDM1AO60341 RNU6-570P-201ENST00000517051 105 ntBASIC3.07□□□□□ -1.92
KDM1AO60341 AC233702.2-202ENST00000562547 291 ntBASIC3.07□□□□□ -1.92
KDM1AO60341 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.07□□□□□ -1.92
KDM1AO60341 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.07□□□□□ -1.92
KDM1AO60341 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
KDM1AO60341 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KDM1AO60341 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.06□□□□□ -1.92
KDM1AO60341 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KDM1AO60341 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KDM1AO60341 SNORD63-201ENST00000384262 68 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 Y_RNA.462-201ENST00000384268 102 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 Y_RNA.518-201ENST00000384552 113 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 MT-TG-201ENST00000387429 68 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 FO393413.1-201ENST00000402892 195 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 Y_RNA.597-201ENST00000410463 100 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 AC004866.1-201ENST00000411748 78 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.06□□□□□ -1.92
KDM1AO60341 Z75741.1-201ENST00000446793 314 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 AC009237.7-201ENST00000447357 229 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 AC080013.2-201ENST00000460866 323 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 TRBVB-201ENST00000477100 408 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 AC098869.1-201ENST00000481627 292 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 AC074133.1-201ENST00000515696 183 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 RNU6-408P-201ENST00000515910 100 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 RNU6-344P-201ENST00000516635 111 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 SNORA70.24-201ENST00000517233 118 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.06□□□□□ -1.92
KDM1AO60341 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.06□□□□□ -1.92
KDM1AO60341 AC107016.2-201ENST00000547968 190 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 RRN3P3-201ENST00000549207 578 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 AC110588.1-201ENST00000559699 137 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 MIR5006-201ENST00000583027 110 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 RPL17P51-201ENST00000605218 238 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 AC062037.2-201ENST00000610137 73 ntBASIC3.06□□□□□ -1.92
KDM1AO60341 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
KDM1AO60341 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KDM1AO60341 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KDM1AO60341 RNU6-727P-201ENST00000363592 107 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 RNU6-961P-201ENST00000363893 105 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 Y_RNA.581-201ENST00000391017 97 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 RNU2-20P-201ENST00000410425 191 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 HMGN2P35-201ENST00000412164 270 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 AC096920.1-201ENST00000423991 241 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 UQCRHP3-201ENST00000451503 251 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 BX510359.1-201ENST00000456973 237 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 AC083906.5-201ENST00000503722 328 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 AC023141.11-201ENST00000508864 202 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 RNU6-586P-201ENST00000517265 104 ntBASIC3.05□□□□□ -1.92
KDM1AO60341 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms