Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MTND4P4-201ENST00000439033 1366 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 Y_RNA.191-201ENST00000363972 113 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 Y_RNA.238-201ENST00000364441 102 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 RNA5SP323-201ENST00000391094 133 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.87□□□□□ -2.27
KDELR3O43731 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
KDELR3O43731 RPL39P38-201ENST00000467018 153 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.87□□□□□ -2.27
KDELR3O43731 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.87□□□□□ -2.27
KDELR3O43731 MIR4703-201ENST00000577728 79 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.87□□□□□ -2.27
KDELR3O43731 AL022161.1-201ENST00000604390 213 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 AC004223.4-201ENST00000612426 332 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.87□□□□□ -2.27
KDELR3O43731 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.87□□□□□ -2.27
KDELR3O43731 SNORA43.4-201ENST00000629559 138 ntBASIC0.87□□□□□ -2.27
KDELR3O43731 MIR520E-201ENST00000384867 87 ntBASIC0.86□□□□□ -2.27
KDELR3O43731 RNU11-5P-201ENST00000391216 129 ntBASIC0.86□□□□□ -2.27
KDELR3O43731 MIR1253-201ENST00000408273 105 ntBASIC0.86□□□□□ -2.27
KDELR3O43731 Z99497.1-201ENST00000421282 135 ntBASIC0.86□□□□□ -2.27
KDELR3O43731 SNORA31.4-201ENST00000516049 129 ntBASIC0.86□□□□□ -2.27
KDELR3O43731 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.86□□□□□ -2.27
KDELR3O43731 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.86□□□□□ -2.27
KDELR3O43731 MIR4452-201ENST00000583004 71 ntBASIC0.86□□□□□ -2.27
KDELR3O43731 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
KDELR3O43731 MIR98-201ENST00000606724 119 ntBASIC0.86□□□□□ -2.27
KDELR3O43731 AC104458.1-201ENST00000608243 463 ntBASIC0.86□□□□□ -2.27
KDELR3O43731 AC009541.1-201ENST00000438279 2662 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 RNU6-1214P-201ENST00000363650 109 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 RNU4-48P-201ENST00000365559 182 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 RNU6-1127P-201ENST00000384580 107 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 SNORA16.2-201ENST00000390991 127 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 AL356776.1-201ENST00000406574 447 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 CDK8P2-201ENST00000415020 547 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 HMGN2P34-201ENST00000437647 269 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.85□□□□□ -2.27
KDELR3O43731 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.85□□□□□ -2.27
KDELR3O43731 SCARNA16.2-201ENST00000516520 172 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.85□□□□□ -2.27
KDELR3O43731 FAM106DP-201ENST00000586416 501 ntBASIC0.85□□□□□ -2.27
KDELR3O43731 RNU4-28P-201ENST00000364739 141 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 RNU6-975P-201ENST00000384296 105 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 MTND3P17-201ENST00000416968 344 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 AC013410.2-201ENST00000422627 201 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.84□□□□□ -2.27
KDELR3O43731 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.84□□□□□ -2.27
KDELR3O43731 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.84□□□□□ -2.27
KDELR3O43731 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.84□□□□□ -2.27
KDELR3O43731 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 SUMO2P16-201ENST00000519475 264 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 MTCO3P23-201ENST00000561363 289 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 AL391840.1-201ENST00000571144 367 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.84□□□□□ -2.27
KDELR3O43731 MIR5006-201ENST00000583027 110 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 TCL6_2.1-201ENST00000615162 119 ntBASIC0.84□□□□□ -2.27
KDELR3O43731 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
KDELR3O43731 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 MIR19B1-201ENST00000384829 87 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 MIR1-2-201ENST00000384961 85 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 AC011233.1-201ENST00000422812 283 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 AC010099.3-201ENST00000423896 409 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.83□□□□□ -2.28
KDELR3O43731 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
KDELR3O43731 SCARNA18-201ENST00000459004 134 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.83□□□□□ -2.28
KDELR3O43731 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 Z84480.1-201ENST00000605131 311 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 AC092354.1-201ENST00000606057 376 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 AC021506.2-201ENST00000612354 169 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 AC009509.4-201ENST00000619202 509 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.83□□□□□ -2.28
KDELR3O43731 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
KDELR3O43731 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 Y_RNA.226-201ENST00000364337 114 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 RNU6-584P-201ENST00000410350 95 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.82□□□□□ -2.28
KDELR3O43731 AL593851.1-201ENST00000426171 157 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.82□□□□□ -2.28
KDELR3O43731 NFU1P2-201ENST00000448700 469 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 DEFB131C-201ENST00000528817 165 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.82□□□□□ -2.28
KDELR3O43731 AL929325.1-201ENST00000603096 117 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 Z99497.2-201ENST00000603634 310 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 U2.17-201ENST00000611454 95 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 AP001506.1-201ENST00000615444 211 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 AC006001.4-201ENST00000622243 395 ntBASIC0.82□□□□□ -2.28
KDELR3O43731 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.82□□□□□ -2.28
KDELR3O43731 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
KDELR3O43731 Y_RNA.399-201ENST00000383955 105 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 RNU6-417P-201ENST00000384712 107 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 MIR549A-201ENST00000385268 96 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 RPL21P1-201ENST00000399532 476 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 RN7SKP200-201ENST00000410564 320 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms