Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNA5SP456-201ENST00000364002 114 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 RNU6-944P-201ENST00000364023 107 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 SNORA25B-201ENST00000365507 128 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 RNU6-1227P-201ENST00000383981 107 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 Y_RNA.428-201ENST00000384078 102 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 RNU6-474P-201ENST00000384243 107 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 RNU6-1156P-201ENST00000410365 100 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 MRPS18CP6-201ENST00000423587 223 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.91□□□□□ -1.94
PRPF3O43395 AL137792.2-201ENST00000443484 235 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 AC245102.2-201ENST00000448956 180 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 Y_RNA.631-201ENST00000459607 101 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 TOMM22P6-201ENST00000465035 409 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 RPS23P5-201ENST00000495419 428 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 ANXA2P1-201ENST00000505539 926 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 AC105758.1-201ENST00000506038 399 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.91□□□□□ -1.94
PRPF3O43395 RNU6-1114P-201ENST00000516022 107 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 RNA5SP320-201ENST00000516263 124 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 RNU6-911P-201ENST00000516523 104 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 CYCSP23-201ENST00000519781 313 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.91□□□□□ -1.94
PRPF3O43395 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.91□□□□□ -1.94
PRPF3O43395 AC026271.5-201ENST00000577873 130 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 MIR3162-201ENST00000581818 82 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 MIR1244-1-201ENST00000612829 85 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 MIR1244-3-201ENST00000635744 85 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 MIR1244-2-201ENST00000636449 85 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 MIR1244-4-202ENST00000636813 85 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRPF3O43395 RNU1-76P-201ENST00000362903 159 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 Y_RNA.252-201ENST00000364556 101 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 RNU6-234P-201ENST00000365229 104 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 RNU6-159P-201ENST00000391080 106 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 MIR548P-201ENST00000408336 84 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 RPL19P1-201ENST00000411635 428 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 SRIP3-201ENST00000413200 219 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 USP9YP16-201ENST00000430287 407 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 AC005534.2-201ENST00000431047 433 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.9□□□□□ -1.95
PRPF3O43395 USP9YP23-201ENST00000455085 407 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.9□□□□□ -1.95
PRPF3O43395 SNORD116.3-201ENST00000517176 78 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 AC027288.2-201ENST00000553028 243 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 AC090617.3-201ENST00000573670 475 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 SNRPGP17-201ENST00000603780 214 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 AL355802.3-201ENST00000607571 545 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 MIR6817-201ENST00000615588 66 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 AC010297.1-201ENST00000623948 149 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.9□□□□□ -1.95
PRPF3O43395 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF3O43395 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF3O43395 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF3O43395 AC007336.1-201ENST00000576365 3828 ntBASIC2.9□□□□□ -1.95
PRPF3O43395 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF3O43395 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
PRPF3O43395 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRPF3O43395 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRPF3O43395 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
PRPF3O43395 RNU1-62P-201ENST00000362599 164 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 RNU1-115P-201ENST00000365329 160 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 RNU6-1072P-201ENST00000384703 107 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 RNU6-443P-201ENST00000384780 107 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 SNORA40.19-201ENST00000390846 128 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 MIR300-201ENST00000401138 83 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 EDDM3CP-201ENST00000415977 425 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 AC018865.2-201ENST00000423631 129 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF3O43395 AC009237.7-201ENST00000447357 229 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRPF3O43395 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.89□□□□□ -1.95
PRPF3O43395 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF3O43395 RNA5SP148-201ENST00000516527 94 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 RNU6-344P-201ENST00000516635 111 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 AC034114.1-201ENST00000520293 285 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 AC104984.5-201ENST00000586878 94 ntBASIC2.89□□□□□ -1.95
PRPF3O43395 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.89□□□□□ -1.95
PRPF3O43395 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.88□□□□□ -1.95
PRPF3O43395 AC009487.4-201ENST00000624969 3585 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 RNU1-23P-201ENST00000363361 144 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 Y_RNA.314-201ENST00000365114 102 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 MIR518C-201ENST00000384822 101 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 SNORA69.1-201ENST00000390904 137 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 RNU6-308P-201ENST00000390957 107 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 HMGN2P35-201ENST00000412164 270 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF3O43395 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF3O43395 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF3O43395 AC090096.1-201ENST00000489168 390 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF3O43395 RNU5F-4P-201ENST00000516581 114 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 CBX3P7-201ENST00000532876 502 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 AC020661.2-201ENST00000560114 134 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 AL132822.1-201ENST00000617063 513 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 U4.3-201ENST00000621047 82 ntBASIC2.88□□□□□ -1.95
PRPF3O43395 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PRPF3O43395 Y_RNA.31-201ENST00000362574 102 ntBASIC2.87□□□□□ -1.95
PRPF3O43395 RNA5SP126-201ENST00000365092 109 ntBASIC2.87□□□□□ -1.95
PRPF3O43395 Y_RNA.496-201ENST00000384444 101 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms