Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 HMGN1P10-201ENST00000474557 553 ntBASIC2.6□□□□□ -1.99
MSI1O43347 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.6□□□□□ -1.99
MSI1O43347 AC023442.1-201ENST00000531247 422 ntBASIC2.6□□□□□ -1.99
MSI1O43347 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.6□□□□□ -1.99
MSI1O43347 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.6□□□□□ -1.99
MSI1O43347 AC006600.1-201ENST00000572529 153 ntBASIC2.6□□□□□ -1.99
MSI1O43347 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.6□□□□□ -1.99
MSI1O43347 U2.1-201ENST00000618978 145 ntBASIC2.6□□□□□ -1.99
MSI1O43347 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
MSI1O43347 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
MSI1O43347 MTND5P16-201ENST00000460269 1703 ntBASIC2.59□□□□□ -1.99
MSI1O43347 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
MSI1O43347 RNU6-486P-201ENST00000363116 107 ntBASIC2.59□□□□□ -1.99
MSI1O43347 Y_RNA.527-201ENST00000384573 102 ntBASIC2.59□□□□□ -1.99
MSI1O43347 Y_RNA.557-201ENST00000384680 107 ntBASIC2.59□□□□□ -1.99
MSI1O43347 CBX3P9-201ENST00000402326 552 ntBASIC2.59□□□□□ -1.99
MSI1O43347 RNA5SP201-201ENST00000410316 124 ntBASIC2.59□□□□□ -1.99
MSI1O43347 Y_RNA.605-201ENST00000410577 105 ntBASIC2.59□□□□□ -1.99
MSI1O43347 RPS26P42-201ENST00000413485 326 ntBASIC2.59□□□□□ -1.99
MSI1O43347 MICF-203ENST00000432679 129 ntBASIC2.59□□□□□ -1.99
MSI1O43347 AL513328.1-201ENST00000446460 224 ntBASIC2.59□□□□□ -1.99
MSI1O43347 RNU7-87P-201ENST00000459343 62 ntBASIC2.59□□□□□ -1.99
MSI1O43347 AP000870.1-201ENST00000472927 406 ntBASIC2.59□□□□□ -1.99
MSI1O43347 ANXA2P1-201ENST00000505539 926 ntBASIC2.59□□□□□ -1.99
MSI1O43347 RNU6-1045P-201ENST00000516321 107 ntBASIC2.59□□□□□ -1.99
MSI1O43347 Y_RNA.676-201ENST00000516393 96 ntBASIC2.59□□□□□ -1.99
MSI1O43347 AC144568.1-201ENST00000520139 137 ntBASIC2.59□□□□□ -1.99
MSI1O43347 CYP4A27P-201ENST00000567218 190 ntBASIC2.59□□□□□ -1.99
MSI1O43347 AL162373.1-201ENST00000620433 407 ntBASIC2.59□□□□□ -1.99
MSI1O43347 U4.3-201ENST00000621047 82 ntBASIC2.59□□□□□ -1.99
MSI1O43347 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.59□□□□□ -2
MSI1O43347 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.59□□□□□ -2
MSI1O43347 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
MSI1O43347 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
MSI1O43347 ZNF271P-202ENST00000465539 1970 ntBASIC2.58□□□□□ -2
MSI1O43347 snoU2_19.1-201ENST00000362361 80 ntBASIC2.58□□□□□ -2
MSI1O43347 Y_RNA.145-201ENST00000363527 102 ntBASIC2.58□□□□□ -2
MSI1O43347 RNA5SP213-201ENST00000391031 106 ntBASIC2.58□□□□□ -2
MSI1O43347 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
MSI1O43347 RNU6-985P-201ENST00000410182 104 ntBASIC2.58□□□□□ -2
MSI1O43347 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.58□□□□□ -2
MSI1O43347 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.58□□□□□ -2
MSI1O43347 RPS15AP7-201ENST00000439294 405 ntBASIC2.58□□□□□ -2
MSI1O43347 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.58□□□□□ -2
MSI1O43347 SNORA40.14-201ENST00000516543 86 ntBASIC2.58□□□□□ -2
MSI1O43347 RNU6-567P-201ENST00000516746 107 ntBASIC2.58□□□□□ -2
MSI1O43347 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
MSI1O43347 HSBP1P1-201ENST00000555205 166 ntBASIC2.58□□□□□ -2
MSI1O43347 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.58□□□□□ -2
MSI1O43347 VN1R91P-201ENST00000594377 169 ntBASIC2.58□□□□□ -2
MSI1O43347 RPL30P11-203ENST00000598995 310 ntBASIC2.58□□□□□ -2
MSI1O43347 AC005520.5-201ENST00000613926 164 ntBASIC2.58□□□□□ -2
MSI1O43347 AL132822.1-201ENST00000617063 513 ntBASIC2.58□□□□□ -2
MSI1O43347 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.58□□□□□ -2
MSI1O43347 AC137590.2-201ENST00000619709 240 ntBASIC2.58□□□□□ -2
MSI1O43347 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.58□□□□□ -2
MSI1O43347 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.58□□□□□ -2
MSI1O43347 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
MSI1O43347 AC010329.5-201ENST00000623497 2174 ntBASIC2.58□□□□□ -2
MSI1O43347 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MSI1O43347 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
MSI1O43347 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
MSI1O43347 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.57□□□□□ -2
MSI1O43347 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
MSI1O43347 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
MSI1O43347 SNORD115-8-201ENST00000363856 82 ntBASIC2.57□□□□□ -2
MSI1O43347 RNU6-450P-201ENST00000364654 107 ntBASIC2.57□□□□□ -2
MSI1O43347 SNORD115-38-201ENST00000365037 82 ntBASIC2.57□□□□□ -2
MSI1O43347 Y_RNA.319-201ENST00000365138 92 ntBASIC2.57□□□□□ -2
MSI1O43347 RNU6-708P-201ENST00000384217 107 ntBASIC2.57□□□□□ -2
MSI1O43347 RNU6-378P-201ENST00000384324 107 ntBASIC2.57□□□□□ -2
MSI1O43347 MIR549A-201ENST00000385268 96 ntBASIC2.57□□□□□ -2
MSI1O43347 RNU6-823P-201ENST00000391042 103 ntBASIC2.57□□□□□ -2
MSI1O43347 MIR208B-201ENST00000401172 77 ntBASIC2.57□□□□□ -2
MSI1O43347 AL590556.1-201ENST00000423231 483 ntBASIC2.57□□□□□ -2
MSI1O43347 AL445305.1-201ENST00000432577 575 ntBASIC2.57□□□□□ -2
MSI1O43347 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
MSI1O43347 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.57□□□□□ -2
MSI1O43347 AC107032.1-201ENST00000485945 480 ntBASIC2.57□□□□□ -2
MSI1O43347 AC132942.1-201ENST00000486753 483 ntBASIC2.57□□□□□ -2
MSI1O43347 RNU6-1046P-201ENST00000516538 107 ntBASIC2.57□□□□□ -2
MSI1O43347 UBL5P4-201ENST00000562584 236 ntBASIC2.57□□□□□ -2
MSI1O43347 AC090617.3-201ENST00000573670 475 ntBASIC2.57□□□□□ -2
MSI1O43347 MIR3923-201ENST00000579521 83 ntBASIC2.57□□□□□ -2
MSI1O43347 AC008737.2-201ENST00000599446 118 ntBASIC2.57□□□□□ -2
MSI1O43347 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.57□□□□□ -2
MSI1O43347 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.57□□□□□ -2
MSI1O43347 FO624990.1-201ENST00000636373 85 ntBASIC2.57□□□□□ -2
MSI1O43347 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.57□□□□□ -2
MSI1O43347 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.57□□□□□ -2
MSI1O43347 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MSI1O43347 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
MSI1O43347 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
MSI1O43347 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
MSI1O43347 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.56□□□□□ -2
MSI1O43347 RNA5SP289-201ENST00000362332 137 ntBASIC2.56□□□□□ -2
MSI1O43347 RNU4-56P-201ENST00000364700 142 ntBASIC2.56□□□□□ -2
MSI1O43347 MIR218-1-201ENST00000384999 110 ntBASIC2.56□□□□□ -2
MSI1O43347 RNU1-139P-201ENST00000391307 165 ntBASIC2.56□□□□□ -2
MSI1O43347 AC114482.1-201ENST00000418010 247 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms