Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNU2-34P-201ENST00000516534 121 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 RNA5SP384-201ENST00000516615 116 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 RNU6-430P-201ENST00000517078 107 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 MTCO2P4-201ENST00000517968 247 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 MTATP6P24-201ENST00000576835 677 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 MIR3937-201ENST00000580135 106 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 AP003465.2-201ENST00000602571 373 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 AL353149.1-201ENST00000610667 244 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 MIR8070-201ENST00000616510 88 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 Y_RNA.159-201ENST00000363674 87 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 MRPL35P1-201ENST00000404272 572 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 MIR1283-1-201ENST00000408494 87 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 MTCYBP8-201ENST00000422855 651 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.18□□□□□ -2.22
CLOCKO15516 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.18□□□□□ -2.22
CLOCKO15516 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 snoU13.27-201ENST00000459278 104 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 RPL30P7-201ENST00000479312 323 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CLOCKO15516 RNU6-612P-201ENST00000516909 102 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 AC019176.1-201ENST00000518519 225 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.18□□□□□ -2.22
CLOCKO15516 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.18□□□□□ -2.22
CLOCKO15516 MTND4P7-201ENST00000523876 130 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 DEFB131C-201ENST00000528817 165 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.18□□□□□ -2.22
CLOCKO15516 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.18□□□□□ -2.22
CLOCKO15516 AC040904.1-201ENST00000590850 223 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 NIFKP6-201ENST00000598115 845 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 AC126177.8-201ENST00000618339 1015 ntBASIC1.18□□□□□ -2.22
CLOCKO15516 BX322639.1-202ENST00000423987 2213 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 RNU6-227P-201ENST00000362865 103 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 MIR194-1-201ENST00000384892 85 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 SNORD73A-201ENST00000386062 65 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.17□□□□□ -2.22
CLOCKO15516 EIF1P1-201ENST00000421436 341 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.17□□□□□ -2.22
CLOCKO15516 snoU13.6-201ENST00000458785 104 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 RNU7-63P-201ENST00000459054 62 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 MTND3P7-201ENST00000474435 343 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 RNU6-323P-201ENST00000521915 107 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.17□□□□□ -2.22
CLOCKO15516 RAB11AP2-201ENST00000545905 639 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.17□□□□□ -2.22
CLOCKO15516 MIR4760-201ENST00000585040 80 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 MIR4753-201ENST00000585119 83 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 uc_338.34-201ENST00000617467 174 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 AC005562.2-201ENST00000618264 111 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.17□□□□□ -2.22
CLOCKO15516 AL359697.1-201ENST00000624879 587 ntBASIC1.17□□□□□ -2.22
CLOCKO15516 RNU6-392P-201ENST00000364926 101 ntBASIC1.16□□□□□ -2.22
CLOCKO15516 RNU6-996P-201ENST00000365438 107 ntBASIC1.16□□□□□ -2.22
CLOCKO15516 MIR499A-201ENST00000384903 122 ntBASIC1.16□□□□□ -2.22
CLOCKO15516 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.16□□□□□ -2.22
CLOCKO15516 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.16□□□□□ -2.22
CLOCKO15516 RPL39P5-202ENST00000512505 151 ntBASIC1.16□□□□□ -2.22
CLOCKO15516 AC026470.2-201ENST00000561492 181 ntBASIC1.16□□□□□ -2.22
CLOCKO15516 HULC.1-201ENST00000612720 240 ntBASIC1.16□□□□□ -2.22
CLOCKO15516 AC023510.2-201ENST00000622162 746 ntBASIC1.16□□□□□ -2.22
CLOCKO15516 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.16□□□□□ -2.22
CLOCKO15516 MIR338-201ENST00000636369 67 ntBASIC1.16□□□□□ -2.22
CLOCKO15516 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLOCKO15516 SNORA29-201ENST00000384183 140 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 RNU6-1065P-201ENST00000384513 106 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 RNA5SP219-201ENST00000390940 113 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.15□□□□□ -2.23
CLOCKO15516 AC073910.1-201ENST00000445047 438 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 AC073415.1-201ENST00000449240 153 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 RPS29P27-201ENST00000463711 170 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 HMGN1P7-201ENST00000491722 313 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 SNORA14.1-201ENST00000516113 141 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 RNU6-948P-201ENST00000516374 107 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.15□□□□□ -2.23
CLOCKO15516 TCL6_2.1-201ENST00000615162 119 ntBASIC1.15□□□□□ -2.23
CLOCKO15516 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.15□□□□□ -2.23
CLOCKO15516 Y_RNA.169-201ENST00000363745 96 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 RNU5A-6P-201ENST00000384136 116 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 RNU6-1235P-201ENST00000384559 107 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 RNU6-331P-201ENST00000384724 107 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 RPS26P42-201ENST00000413485 326 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 COX6CP10-201ENST00000416832 224 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.14□□□□□ -2.23
CLOCKO15516 RPS6P15-201ENST00000431996 751 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 RNU6-498P-201ENST00000459468 107 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 ARL2BPP4-201ENST00000506854 471 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 CCDC34P1-201ENST00000507441 517 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 AC025465.4-201ENST00000513422 638 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 Y_RNA.673-201ENST00000516306 88 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.14□□□□□ -2.23
CLOCKO15516 MIR5006-201ENST00000583027 110 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 AC004223.2-201ENST00000590309 544 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 AC104458.1-201ENST00000608243 463 ntBASIC1.14□□□□□ -2.23
CLOCKO15516 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CLOCKO15516 RNU5B-2P-201ENST00000363036 113 ntBASIC1.13□□□□□ -2.23
CLOCKO15516 SNORA72.2-201ENST00000365028 127 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms