Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 Y_RNA.456-201ENST00000384232 111 ntBASIC3.28□□□□□ -1.88
SHOXO15266 RNU6-855P-201ENST00000410395 104 ntBASIC3.28□□□□□ -1.88
SHOXO15266 RNU6-394P-201ENST00000410735 107 ntBASIC3.28□□□□□ -1.88
SHOXO15266 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.28□□□□□ -1.88
SHOXO15266 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOXO15266 HMGN2P9-201ENST00000476875 229 ntBASIC3.28□□□□□ -1.88
SHOXO15266 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
SHOXO15266 RNU6-1098P-201ENST00000516772 96 ntBASIC3.28□□□□□ -1.88
SHOXO15266 MTND1P7-201ENST00000632801 297 ntBASIC3.28□□□□□ -1.88
SHOXO15266 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SHOXO15266 MIR7157-201ENST00000635801 60 ntBASIC3.28□□□□□ -1.88
SHOXO15266 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOXO15266 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOXO15266 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHOXO15266 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHOXO15266 Z82209.1-201ENST00000422141 2135 ntBASIC3.28□□□□□ -1.89
SHOXO15266 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
SHOXO15266 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOXO15266 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOXO15266 AL355596.1-201ENST00000565399 3996 ntBASIC3.27□□□□□ -1.89
SHOXO15266 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOXO15266 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHOXO15266 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOXO15266 SNORD114-7-201ENST00000362520 77 ntBASIC3.27□□□□□ -1.89
SHOXO15266 Y_RNA.341-201ENST00000365341 102 ntBASIC3.27□□□□□ -1.89
SHOXO15266 Y_RNA.368-201ENST00000365547 113 ntBASIC3.27□□□□□ -1.89
SHOXO15266 Y_RNA.441-201ENST00000384123 112 ntBASIC3.27□□□□□ -1.89
SHOXO15266 MIR1185-2-201ENST00000408687 86 ntBASIC3.27□□□□□ -1.89
SHOXO15266 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.27□□□□□ -1.89
SHOXO15266 RNU7-14P-201ENST00000459331 62 ntBASIC3.27□□□□□ -1.89
SHOXO15266 RNU7-200P-201ENST00000516105 62 ntBASIC3.27□□□□□ -1.89
SHOXO15266 SCARNA17.1-201ENST00000516211 143 ntBASIC3.27□□□□□ -1.89
SHOXO15266 SCARNA17.2-201ENST00000516334 143 ntBASIC3.27□□□□□ -1.89
SHOXO15266 RNU6-586P-201ENST00000517265 104 ntBASIC3.27□□□□□ -1.89
SHOXO15266 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.27□□□□□ -1.89
SHOXO15266 AC100767.1-201ENST00000528178 123 ntBASIC3.27□□□□□ -1.89
SHOXO15266 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOXO15266 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.27□□□□□ -1.89
SHOXO15266 ARF4P1-201ENST00000605447 541 ntBASIC3.27□□□□□ -1.89
SHOXO15266 AC104465.1-201ENST00000611365 139 ntBASIC3.27□□□□□ -1.89
SHOXO15266 SCARNA17.4-201ENST00000614296 143 ntBASIC3.27□□□□□ -1.89
SHOXO15266 AC013791.1-201ENST00000616619 62 ntBASIC3.27□□□□□ -1.89
SHOXO15266 MIR3653-201ENST00000625572 110 ntBASIC3.27□□□□□ -1.89
SHOXO15266 AC132825.6-201ENST00000638861 357 ntBASIC3.27□□□□□ -1.89
SHOXO15266 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOXO15266 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHOXO15266 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SHOXO15266 FAM35CP-201ENST00000554755 2470 ntBASIC3.26□□□□□ -1.89
SHOXO15266 RNU6-899P-201ENST00000363947 107 ntBASIC3.26□□□□□ -1.89
SHOXO15266 RNU6-283P-201ENST00000364788 107 ntBASIC3.26□□□□□ -1.89
SHOXO15266 Y_RNA.361-201ENST00000365515 120 ntBASIC3.26□□□□□ -1.89
SHOXO15266 SNORA72.4-201ENST00000384174 132 ntBASIC3.26□□□□□ -1.89
SHOXO15266 AL355497.1-201ENST00000406262 551 ntBASIC3.26□□□□□ -1.89
SHOXO15266 MIR1283-1-201ENST00000408494 87 ntBASIC3.26□□□□□ -1.89
SHOXO15266 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.26□□□□□ -1.89
SHOXO15266 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
SHOXO15266 AC091167.1-201ENST00000492017 396 ntBASIC3.26□□□□□ -1.89
SHOXO15266 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.26□□□□□ -1.89
SHOXO15266 AC005840.1-201ENST00000498412 377 ntBASIC3.26□□□□□ -1.89
SHOXO15266 SEM1P1-201ENST00000506694 209 ntBASIC3.26□□□□□ -1.89
SHOXO15266 RN7SKP164-201ENST00000516138 266 ntBASIC3.26□□□□□ -1.89
SHOXO15266 MIR8059-201ENST00000620427 81 ntBASIC3.26□□□□□ -1.89
SHOXO15266 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.26□□□□□ -1.89
SHOXO15266 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHOXO15266 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHOXO15266 AL159152.1-201ENST00000635019 2587 ntBASIC3.26□□□□□ -1.89
SHOXO15266 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHOXO15266 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHOXO15266 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHOXO15266 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SHOXO15266 AC009487.4-201ENST00000624969 3585 ntBASIC3.25□□□□□ -1.89
SHOXO15266 Y_RNA.8-201ENST00000362353 102 ntBASIC3.25□□□□□ -1.89
SHOXO15266 Y_RNA.23-201ENST00000362496 106 ntBASIC3.25□□□□□ -1.89
SHOXO15266 RNU6-801P-201ENST00000364087 105 ntBASIC3.25□□□□□ -1.89
SHOXO15266 Y_RNA.293-201ENST00000364908 93 ntBASIC3.25□□□□□ -1.89
SHOXO15266 Y_RNA.357-201ENST00000365487 109 ntBASIC3.25□□□□□ -1.89
SHOXO15266 AL359837.1-201ENST00000381357 287 ntBASIC3.25□□□□□ -1.89
SHOXO15266 RNU6-804P-201ENST00000384286 107 ntBASIC3.25□□□□□ -1.89
SHOXO15266 MIR613-201ENST00000385248 95 ntBASIC3.25□□□□□ -1.89
SHOXO15266 RNU2-2P-201ENST00000410396 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 RNU6-1135P-201ENST00000411083 103 ntBASIC3.25□□□□□ -1.89
SHOXO15266 AC126124.2-201ENST00000413542 321 ntBASIC3.25□□□□□ -1.89
SHOXO15266 AL353705.1-201ENST00000433468 480 ntBASIC3.25□□□□□ -1.89
SHOXO15266 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.25□□□□□ -1.89
SHOXO15266 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.25□□□□□ -1.89
SHOXO15266 RPS27AP9-201ENST00000477681 438 ntBASIC3.25□□□□□ -1.89
SHOXO15266 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.25□□□□□ -1.89
SHOXO15266 SUMO2P18-201ENST00000518873 252 ntBASIC3.25□□□□□ -1.89
SHOXO15266 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.25□□□□□ -1.89
SHOXO15266 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.25□□□□□ -1.89
SHOXO15266 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.25□□□□□ -1.89
SHOXO15266 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.25□□□□□ -1.89
SHOXO15266 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.25□□□□□ -1.89
SHOXO15266 AL606490.9-201ENST00000603331 271 ntBASIC3.25□□□□□ -1.89
SHOXO15266 RNU2-4P-201ENST00000606190 192 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.15-201ENST00000611544 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.16-201ENST00000613119 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.12-201ENST00000613778 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.9-201ENST00000615427 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.11-201ENST00000616345 191 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms