Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RNU6-24P-201ENST00000384440 107 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 ZNF885P-201ENST00000420174 1098 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC-1.49□□□□□ -2.65
NDUFA1O15239 AL163973.1-201ENST00000484753 577 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 RPL17P19-201ENST00000489069 552 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.49□□□□□ -2.65
NDUFA1O15239 AC090572.1-201ENST00000519251 160 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1.49□□□□□ -2.65
NDUFA1O15239 AC023158.1-201ENST00000561632 1025 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 AP001429.1-201ENST00000602568 530 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 AL159972.1-201ENST00000625150 448 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 MIR4275-201ENST00000636486 87 ntBASIC-1.49□□□□□ -2.65
NDUFA1O15239 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 SNORD113.3-201ENST00000364630 78 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.5□□□□□ -2.65
NDUFA1O15239 RPS15AP10-201ENST00000432472 382 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 LARP1BP3-201ENST00000437229 869 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.5□□□□□ -2.65
NDUFA1O15239 AC092685.1-201ENST00000447960 1243 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 AC104629.2-201ENST00000468627 598 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 RPL39P34-201ENST00000477141 156 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.5□□□□□ -2.65
NDUFA1O15239 MTCO3P28-201ENST00000513351 515 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 RNA5SP476-201ENST00000516613 103 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 AP003168.1-201ENST00000530091 307 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.5□□□□□ -2.65
NDUFA1O15239 AC022960.3-201ENST00000619794 441 ntBASIC-1.5□□□□□ -2.65
NDUFA1O15239 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.5□□□□□ -2.65
NDUFA1O15239 SNORA36.1-201ENST00000363424 132 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-1.51□□□□□ -2.65
NDUFA1O15239 SNRPEP8-201ENST00000442866 260 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 AL133217.1-201ENST00000450980 425 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 AC007215.1-201ENST00000464893 276 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 RNU6-840P-201ENST00000517275 65 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 AC105029.1-201ENST00000520250 669 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.51□□□□□ -2.65
NDUFA1O15239 TMF1P1-201ENST00000576058 373 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 AL513423.1-201ENST00000621695 132 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 AC106754.1-201ENST00000562632 1513 ntBASIC-1.51□□□□□ -2.65
NDUFA1O15239 RNU6-369P-201ENST00000362515 102 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 RNU6-811P-201ENST00000384069 107 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 RNU6-187P-201ENST00000384139 106 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.52□□□□□ -2.65
NDUFA1O15239 AC015724.1-201ENST00000478577 156 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 RNU2-46P-201ENST00000517038 113 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 MRPS36P4-201ENST00000534436 298 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 AC023824.3-201ENST00000569003 562 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 VN1R83P-201ENST00000595685 445 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 7SK.7-201ENST00000603504 247 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 HMGB1P51-201ENST00000605166 638 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 AC063944.3-201ENST00000609969 533 ntBASIC-1.52□□□□□ -2.65
NDUFA1O15239 MIR655-201ENST00000362159 97 ntBASIC-1.53□□□□□ -2.65
NDUFA1O15239 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.53□□□□□ -2.65
NDUFA1O15239 MIR1185-1-201ENST00000408598 86 ntBASIC-1.53□□□□□ -2.65
NDUFA1O15239 AC010154.1-201ENST00000425857 269 ntBASIC-1.53□□□□□ -2.65
NDUFA1O15239 AC010153.1-201ENST00000432862 727 ntBASIC-1.53□□□□□ -2.65
NDUFA1O15239 RNA5SP337-201ENST00000517007 109 ntBASIC-1.53□□□□□ -2.65
NDUFA1O15239 MIR3165-201ENST00000579874 75 ntBASIC-1.53□□□□□ -2.65
NDUFA1O15239 MIR3192-201ENST00000584920 77 ntBASIC-1.53□□□□□ -2.65
NDUFA1O15239 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.53□□□□□ -2.65
NDUFA1O15239 SNORA2.2-201ENST00000365473 135 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 MIR660-201ENST00000385235 97 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 SNORA26.3-201ENST00000391119 136 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 SNORA26-201ENST00000391286 122 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 MLLT10P1-201ENST00000418346 262 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 MTND1P14-201ENST00000427400 950 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 RNU6-274P-201ENST00000459566 107 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.54□□□□□ -2.66
NDUFA1O15239 OR8K2P-201ENST00000524645 927 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 SNORA59B-202ENST00000578183 701 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 AC100830.2-201ENST00000581636 240 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.54□□□□□ -2.66
NDUFA1O15239 RNA5SP192-201ENST00000364404 120 ntBASIC-1.55□□□□□ -2.66
NDUFA1O15239 SNORA72.2-201ENST00000365028 127 ntBASIC-1.55□□□□□ -2.66
NDUFA1O15239 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.55□□□□□ -2.66
NDUFA1O15239 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.55□□□□□ -2.66
NDUFA1O15239 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.55□□□□□ -2.66
NDUFA1O15239 USP9YP11-201ENST00000427537 717 ntBASIC-1.55□□□□□ -2.66
NDUFA1O15239 SNORD57-201ENST00000448188 72 ntBASIC-1.55□□□□□ -2.66
NDUFA1O15239 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.55□□□□□ -2.66
NDUFA1O15239 RNA5SP470-201ENST00000516463 106 ntBASIC-1.55□□□□□ -2.66
NDUFA1O15239 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.55□□□□□ -2.66
NDUFA1O15239 MIR378F-201ENST00000578143 78 ntBASIC-1.55□□□□□ -2.66
NDUFA1O15239 AL442067.1-201ENST00000613261 223 ntBASIC-1.55□□□□□ -2.66
NDUFA1O15239 MIR6514-201ENST00000622549 70 ntBASIC-1.55□□□□□ -2.66
NDUFA1O15239 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.55□□□□□ -2.66
NDUFA1O15239 MIR409-201ENST00000362237 79 ntBASIC-1.56□□□□□ -2.66
NDUFA1O15239 RNU4-16P-201ENST00000364737 141 ntBASIC-1.56□□□□□ -2.66
NDUFA1O15239 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.56□□□□□ -2.66
NDUFA1O15239 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.56□□□□□ -2.66
NDUFA1O15239 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.56□□□□□ -2.66
NDUFA1O15239 DEFB130D-201ENST00000426866 237 ntBASIC-1.56□□□□□ -2.66
NDUFA1O15239 MTATP6P30-201ENST00000443540 664 ntBASIC-1.56□□□□□ -2.66
NDUFA1O15239 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.56□□□□□ -2.66
NDUFA1O15239 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.56□□□□□ -2.66
NDUFA1O15239 RN7SKP19-201ENST00000516016 252 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms