Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.61□□□□□ -1.99
PCDH17O14917 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PCDH17O14917 RNU6-874P-201ENST00000362390 105 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 RNU4-82P-201ENST00000362443 140 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 RNU6-26P-201ENST00000383985 107 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 RNU6-159P-201ENST00000391080 106 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 Y_RNA.592-201ENST00000410274 109 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 RNU2-32P-201ENST00000411193 191 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 AC114482.1-201ENST00000418010 247 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.61□□□□□ -1.99
PCDH17O14917 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 RNU6-911P-201ENST00000516523 104 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 ELOCP31-201ENST00000540463 467 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 GNAI2P1-201ENST00000541815 315 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDH17O14917 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDH17O14917 AC092447.9-201ENST00000603395 144 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 SNRPGP17-201ENST00000603780 214 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 AC083806.3-201ENST00000614016 455 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 TCL6_2.1-201ENST00000615162 119 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 IGHVIII-44-202ENST00000636235 289 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 ZNF204P-201ENST00000416749 2397 ntBASIC2.61□□□□□ -1.99
PCDH17O14917 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDH17O14917 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PCDH17O14917 RNU6-222P-201ENST00000362438 107 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 Y_RNA.28-201ENST00000362554 111 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 RNU6-859P-201ENST00000362728 107 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 SNORA38-201ENST00000363946 132 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 Y_RNA.358-201ENST00000365491 99 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 XGY1-201ENST00000381172 446 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 RNU6-474P-201ENST00000384243 107 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 Y_RNA.496-201ENST00000384444 101 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PCDH17O14917 MCFD2P1-201ENST00000417812 300 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 MTCYBP6-201ENST00000441810 138 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 RNU7-26P-201ENST00000458980 63 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 AC003982.1-202ENST00000469928 248 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDH17O14917 RNU6-475P-201ENST00000516073 104 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 Y_RNA.711-201ENST00000516993 102 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDH17O14917 MIR4435-1-201ENST00000582552 80 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 AC006157.1-201ENST00000611750 366 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 AC087588.2-201ENST00000617667 426 ntBASIC2.6□□□□□ -1.99
PCDH17O14917 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDH17O14917 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PCDH17O14917 RNU1-23P-201ENST00000363361 144 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 Y_RNA.202-201ENST00000364083 110 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 RNY1P14-201ENST00000384426 108 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.59□□□□□ -1.99
PCDH17O14917 MTCO3P19-201ENST00000415864 321 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 AC027124.2-201ENST00000428249 105 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 AC096638.1-201ENST00000444678 216 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 SNORD109B-201ENST00000458961 67 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 SNORD109A-201ENST00000459128 67 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDH17O14917 RNU6-1153P-201ENST00000516760 105 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PCDH17O14917 CBX3P7-201ENST00000532876 502 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 AC079600.2-201ENST00000550076 130 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 AC020661.2-201ENST00000560114 134 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDH17O14917 MIR5695-201ENST00000579717 85 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 MIR5194-201ENST00000582634 120 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 MIR3171-201ENST00000584270 74 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 VN1R91P-201ENST00000594377 169 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 U2.1-201ENST00000618978 145 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 AL606534.2-204ENST00000635008 178 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 MIR4272-201ENST00000635924 64 ntBASIC2.59□□□□□ -1.99
PCDH17O14917 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
PCDH17O14917 RNU1-76P-201ENST00000362903 159 ntBASIC2.58□□□□□ -2
PCDH17O14917 RNU6-873P-201ENST00000363833 107 ntBASIC2.58□□□□□ -2
PCDH17O14917 RNU6-234P-201ENST00000365229 104 ntBASIC2.58□□□□□ -2
PCDH17O14917 SNORA18.2-201ENST00000383865 132 ntBASIC2.58□□□□□ -2
PCDH17O14917 Y_RNA.526-201ENST00000384572 110 ntBASIC2.58□□□□□ -2
PCDH17O14917 MIR487A-201ENST00000385009 80 ntBASIC2.58□□□□□ -2
PCDH17O14917 MIR10B-201ENST00000385011 110 ntBASIC2.58□□□□□ -2
PCDH17O14917 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
PCDH17O14917 PMCHL1-202ENST00000423102 261 ntBASIC2.58□□□□□ -2
PCDH17O14917 OOSP1P1-201ENST00000423265 274 ntBASIC2.58□□□□□ -2
PCDH17O14917 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.58□□□□□ -2
PCDH17O14917 ARL5AP4-201ENST00000430731 512 ntBASIC2.58□□□□□ -2
PCDH17O14917 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.58□□□□□ -2
PCDH17O14917 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.58□□□□□ -2
PCDH17O14917 AC009238.1-201ENST00000442165 424 ntBASIC2.58□□□□□ -2
PCDH17O14917 MTND4P19-201ENST00000446659 478 ntBASIC2.58□□□□□ -2
PCDH17O14917 AC009237.6-201ENST00000446969 424 ntBASIC2.58□□□□□ -2
PCDH17O14917 AC096725.1-201ENST00000514266 313 ntBASIC2.58□□□□□ -2
PCDH17O14917 SNORA25.10-201ENST00000515926 124 ntBASIC2.58□□□□□ -2
PCDH17O14917 SNORA25.14-201ENST00000516481 132 ntBASIC2.58□□□□□ -2
PCDH17O14917 RNU5F-4P-201ENST00000516581 114 ntBASIC2.58□□□□□ -2
PCDH17O14917 AC006600.1-201ENST00000572529 153 ntBASIC2.58□□□□□ -2
PCDH17O14917 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.58□□□□□ -2
PCDH17O14917 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.58□□□□□ -2
PCDH17O14917 ZNF861P-201ENST00000588126 639 ntBASIC2.58□□□□□ -2
PCDH17O14917 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms