Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 RPS23P5-201ENST00000495419 428 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 MTND5P5-201ENST00000503764 376 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN4O14493 AP005660.1-201ENST00000522972 293 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 DEFB131C-201ENST00000528817 165 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN4O14493 AC078899.2-201ENST00000595282 212 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN4O14493 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.01□□□□□ -2.09
CLDN4O14493 SCARNA4-201ENST00000629045 128 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 CENPCP1-201ENST00000533085 2578 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN4O14493 RNU1-76P-201ENST00000362903 159 ntBASIC2□□□□□ -2.09
CLDN4O14493 RNU6-767P-201ENST00000384132 107 ntBASIC2□□□□□ -2.09
CLDN4O14493 RNU6-1026P-201ENST00000384465 108 ntBASIC2□□□□□ -2.09
CLDN4O14493 RN7SKP32-201ENST00000410167 303 ntBASIC2□□□□□ -2.09
CLDN4O14493 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
CLDN4O14493 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2□□□□□ -2.09
CLDN4O14493 USP9YP30-201ENST00000430729 455 ntBASIC2□□□□□ -2.09
CLDN4O14493 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2□□□□□ -2.09
CLDN4O14493 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2□□□□□ -2.09
CLDN4O14493 SNRPEP8-201ENST00000442866 260 ntBASIC2□□□□□ -2.09
CLDN4O14493 AC104435.1-201ENST00000483483 166 ntBASIC2□□□□□ -2.09
CLDN4O14493 RNA5SP458-201ENST00000516188 119 ntBASIC2□□□□□ -2.09
CLDN4O14493 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2□□□□□ -2.09
CLDN4O14493 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2□□□□□ -2.09
CLDN4O14493 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2□□□□□ -2.09
CLDN4O14493 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2□□□□□ -2.09
CLDN4O14493 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2□□□□□ -2.09
CLDN4O14493 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2□□□□□ -2.09
CLDN4O14493 MIR4273-201ENST00000582824 84 ntBASIC2□□□□□ -2.09
CLDN4O14493 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2□□□□□ -2.09
CLDN4O14493 RPL17P51-201ENST00000605218 238 ntBASIC2□□□□□ -2.09
CLDN4O14493 AC005562.2-201ENST00000618264 111 ntBASIC2□□□□□ -2.09
CLDN4O14493 AC137590.2-201ENST00000619709 240 ntBASIC2□□□□□ -2.09
CLDN4O14493 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
CLDN4O14493 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN4O14493 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
CLDN4O14493 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2□□□□□ -2.09
CLDN4O14493 RNA5SP276-201ENST00000362580 94 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 Y_RNA.238-201ENST00000364441 102 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 RNU4-9P-201ENST00000364951 139 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 Y_RNA.332-201ENST00000365271 113 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 MIR597-201ENST00000384968 97 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 MIR487A-201ENST00000385009 80 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 MIR17-201ENST00000385012 84 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 MT-TL1-201ENST00000386347 75 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 RNU11-3P-201ENST00000391111 133 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 AL079342.1-201ENST00000401460 267 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 MIR1283-2-201ENST00000408621 87 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 Z82188.1-201ENST00000436709 154 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN4O14493 AL035666.1-201ENST00000446195 348 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.99□□□□□ -2.09
CLDN4O14493 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 RPL31P58-201ENST00000469001 379 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 AC116337.1-201ENST00000509680 687 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 AC005668.1-201ENST00000571142 476 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN4O14493 AC130454.1-201ENST00000622948 401 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN4O14493 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
CLDN4O14493 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN4O14493 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN4O14493 RNU1-58P-201ENST00000362413 163 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 Y_RNA.279-201ENST00000364763 95 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 RNU6-160P-201ENST00000384591 107 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 MIR32-201ENST00000384965 70 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 SNORA12.2-201ENST00000391040 156 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 RNA5SP465-201ENST00000391195 109 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 MIR548K-201ENST00000408406 116 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 AC123900.1-201ENST00000420390 96 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 AC096920.1-201ENST00000423991 241 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 RPS3AP52-201ENST00000435639 297 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 AC004386.2-201ENST00000441858 148 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 AC046134.1-201ENST00000514454 666 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 RNU2-44P-201ENST00000516795 194 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 RNU7-30P-201ENST00000516835 62 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN4O14493 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN4O14493 AC026470.2-201ENST00000561492 181 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN4O14493 MIR5006-201ENST00000583027 110 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 AC010928.2-201ENST00000588017 287 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.98□□□□□ -2.09
CLDN4O14493 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.98□□□□□ -2.09
CLDN4O14493 AC091932.3-201ENST00000624223 323 ntBASIC1.98□□□□□ -2.09
CLDN4O14493 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN4O14493 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CLDN4O14493 RNU6-23P-201ENST00000363283 107 ntBASIC1.97□□□□□ -2.09
CLDN4O14493 SNORD31B-201ENST00000364977 69 ntBASIC1.97□□□□□ -2.09
CLDN4O14493 U8.10-201ENST00000384260 133 ntBASIC1.97□□□□□ -2.09
CLDN4O14493 Y_RNA.533-201ENST00000384596 114 ntBASIC1.97□□□□□ -2.09
CLDN4O14493 FGF7P8-201ENST00000402994 292 ntBASIC1.97□□□□□ -2.09
CLDN4O14493 RNU6-174P-201ENST00000410406 106 ntBASIC1.97□□□□□ -2.09
CLDN4O14493 AC074085.1-201ENST00000413598 418 ntBASIC1.97□□□□□ -2.09
CLDN4O14493 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLDN4O14493 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN4O14493 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CLDN4O14493 AC107399.1-201ENST00000451226 265 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms