Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MTCO3P41-201ENST00000414801 328 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AL606662.1-201ENST00000445763 553 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC093303.1-201ENST00000514549 295 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 SNORA25.12-201ENST00000516202 82 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC009902.1-201ENST00000519351 183 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC090049.2-201ENST00000550377 109 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC109446.1-201ENST00000566172 220 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC107905.1-201ENST00000616204 426 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AL356094.1-201ENST00000624663 1212 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC107982.1-201ENST00000507171 1300 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 RNU6-877P-201ENST00000383868 107 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 RNU6-701P-201ENST00000384059 107 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 SNORA80D-201ENST00000384488 135 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 MIR653-201ENST00000385279 96 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 SNORD65.1-201ENST00000390889 71 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 SNORA12-201ENST00000391162 147 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC006366.1-201ENST00000422002 759 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC104982.1-201ENST00000478775 574 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 RNU6-760P-201ENST00000516078 97 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 RNU2-53P-201ENST00000516257 147 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 SNRPGP1-201ENST00000553864 222 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 MIR3923-201ENST00000579521 83 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 RPL17P51-201ENST00000605218 238 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AL451064.1-201ENST00000607718 471 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AL136317.1-201ENST00000612653 226 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 BX322639.1-202ENST00000423987 2213 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 MTND4P5-201ENST00000435821 1374 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
CACNA1AO00555 MIR340-201ENST00000362125 95 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 SNORA42.1-201ENST00000363515 137 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 RNU4-56P-201ENST00000364700 142 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 SNORD116-23-201ENST00000384645 92 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 RNU6-278P-201ENST00000390945 109 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC104629.1-201ENST00000494226 508 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 MTATP6P9-201ENST00000515039 680 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC112206.4-201ENST00000515142 405 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 RNU6-917P-201ENST00000516294 104 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC090888.2-201ENST00000559765 1144 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC092325.1-201ENST00000566449 554 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC104408.1-201ENST00000605241 170 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AL353765.1-201ENST00000605514 183 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.08□□□□□ -2.42
CACNA1AO00555 RMST_10.1-201ENST00000616309 154 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 AL445264.1-201ENST00000621719 171 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 OR5AK4P-201ENST00000635912 903 ntBASIC-0.08□□□□□ -2.42
CACNA1AO00555 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 RNU1-76P-201ENST00000362903 159 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 MIR10A-201ENST00000385043 110 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 MIR660-201ENST00000385235 97 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 GTF2IP3-201ENST00000433887 494 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 AP002453.2-201ENST00000533503 320 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.09□□□□□ -2.42
CACNA1AO00555 RPL23AP91-201ENST00000569211 455 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 SNORA59B-202ENST00000578183 701 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 Z99497.2-201ENST00000603634 310 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 AC116165.2-201ENST00000616705 206 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 AL157786.1-207ENST00000627771 695 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 CDR1-202ENST00000625883 1485 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 RNU6-839P-201ENST00000363347 108 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 SNORD32B-201ENST00000364460 84 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 SNORD113.3-201ENST00000364630 78 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 SNORD51.1-201ENST00000365405 77 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
CACNA1AO00555 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.09□□□□□ -2.42
CACNA1AO00555 MTCO2P1-201ENST00000424648 477 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 MTND1P20-201ENST00000430341 950 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 AL627311.1-201ENST00000431514 115 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms