Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 Y_RNA.279-201ENST00000364763 95 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-790P-201ENST00000384479 105 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AL627390.1-201ENST00000396055 340 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 HMGN2P39-201ENST00000398005 273 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 HMGB1P18-201ENST00000438801 619 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AL353572.1-201ENST00000442490 417 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AL137159.1-201ENST00000452808 512 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-567P-201ENST00000516746 107 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU2-44P-201ENST00000516795 194 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AC011712.1-201ENST00000588959 234 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AC124303.1-201ENST00000605703 360 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AC019193.3-201ENST00000609144 554 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-743P-201ENST00000364151 106 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 RNA5SP190-201ENST00000365222 118 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-26P-201ENST00000383985 107 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-968P-201ENST00000384076 107 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-306P-201ENST00000384617 107 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU2-41P-201ENST00000410991 178 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AL603825.1-201ENST00000438481 80 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 DAP3P1-201ENST00000441522 278 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AC107032.1-201ENST00000485945 480 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 RPL23AP75-201ENST00000491601 451 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AF186996.7-201ENST00000492781 209 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 MTND5P5-201ENST00000503764 376 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 Y_RNA.682-201ENST00000516457 100 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 ANP32BP3-201ENST00000559213 706 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 POLR3GP2-201ENST00000588366 668 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AL031274.2-201ENST00000599419 203 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.84□□□□□ -2.11
NEDD8-MDP1E9PL57 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.84□□□□□ -2.12
NEDD8-MDP1E9PL57 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 SNORA16B-201ENST00000364674 135 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-234P-201ENST00000365229 104 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 Y_RNA.339-201ENST00000365325 102 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 Y_RNA.390-201ENST00000383932 102 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR208B-201ENST00000401172 77 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR548K-201ENST00000408406 116 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 RNA5SP270-201ENST00000411361 118 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 RPS26P42-201ENST00000413485 326 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 HMGN2P18-201ENST00000450680 270 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 PPP1R2P5-201ENST00000457256 603 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 SNORD13-201ENST00000459299 104 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AC132942.1-201ENST00000486753 483 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AC093259.1-201ENST00000509755 300 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AC046134.1-201ENST00000514454 666 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AL022345.1-201ENST00000607292 135 ntBASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NEDD8-MDP1E9PL57 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 AC233981.2-201ENST00000611524 1614 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 CBX3P1-201ENST00000325243 554 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 Y_RNA.160-201ENST00000363677 92 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-596P-201ENST00000365395 98 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-1093P-201ENST00000391194 107 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-174P-201ENST00000410406 106 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 RNA5SP494-201ENST00000410653 129 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 SRIP3-201ENST00000413200 219 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 Z82205.1-201ENST00000428456 297 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms