Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNU4-15P-201ENST00000362613 141 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 RNA5SP361-201ENST00000362686 118 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.461-201ENST00000384263 103 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 RNU6-472P-201ENST00000384299 107 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 AL590004.2-201ENST00000404787 371 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 RNA5SP201-201ENST00000410316 124 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 SNORD12B-201ENST00000410433 91 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 AL445305.1-201ENST00000432577 575 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 AC087499.2-201ENST00000432861 149 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 AC112220.1-201ENST00000434628 355 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 PCNPP5-201ENST00000452246 481 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 RPL23AP70-201ENST00000483361 460 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 RNA5SP112-201ENST00000515937 99 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 AC078899.3-201ENST00000599065 212 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 AC110774.1-201ENST00000623567 2018 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 AC092593.1-201ENST00000515413 1815 ntBASIC3.3□□□□□ -1.88
PTPDC1A2A3K4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 ZNF204P-201ENST00000416749 2397 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.105-201ENST00000363182 111 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 RNU6-873P-201ENST00000363833 107 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.288-201ENST00000364854 92 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.376-201ENST00000365638 108 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 RNU6-1145P-201ENST00000384246 107 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 RNU6-378P-201ENST00000384324 107 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 MIR329-1-201ENST00000385028 80 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 AL512633.1-201ENST00000399931 655 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 AL079342.1-201ENST00000401460 267 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 RNU6-121P-201ENST00000410525 99 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 RNU6-1001P-201ENST00000411265 100 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 RPL31P41-201ENST00000477967 372 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 MIR4319-201ENST00000577285 85 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 RPL12P50-201ENST00000603116 116 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 AC062037.2-201ENST00000610137 73 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 AC011476.5-201ENST00000615594 130 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPDC1A2A3K4 AC026241.1-201ENST00000517873 2142 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.188-201ENST00000363952 111 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 RNU6-245P-201ENST00000384020 107 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 SNORD115-46-201ENST00000390982 71 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 MIR320B2-201ENST00000408479 138 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 EIF4EP4-201ENST00000424916 578 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 AC023824.2-201ENST00000566185 400 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 AC103810.1-201ENST00000579873 453 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 MIR376A1-201ENST00000616574 68 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 LINC02555-201ENST00000563933 1951 ntBASIC3.28□□□□□ -1.88
PTPDC1A2A3K4 Y_RNA.143-201ENST00000363520 106 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 RNU6-926P-201ENST00000384075 107 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 MT-TW-201ENST00000387382 68 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 CBX3P6-201ENST00000430257 527 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 RNU6-408P-201ENST00000515910 100 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 SNORA25.14-201ENST00000516481 132 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 RN7SKP282-201ENST00000516824 299 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 AC136932.1-201ENST00000574771 208 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 MIR4672-201ENST00000583126 81 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 SNRPGP20-201ENST00000604477 205 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 AC010999.1-201ENST00000611856 324 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
PTPDC1A2A3K4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 AC069528.2-201ENST00000624849 1991 ntBASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 RNU6-486P-201ENST00000363116 107 ntBASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 U3.9-201ENST00000363823 204 ntBASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 RPL21P38-201ENST00000418090 167 ntBASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 AC145146.1-201ENST00000496370 254 ntBASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 EIF4A1P12-201ENST00000551910 141 ntBASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 MIR4300-201ENST00000581016 96 ntBASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 AC008739.2-201ENST00000597006 317 ntBASIC3.26□□□□□ -1.89
PTPDC1A2A3K4 AC099654.7-201ENST00000635788 2127 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms