Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.49□□□□□ -2.01
TCRBV7S3A2A0A539 AL132822.1-201ENST00000617063 513 ntBASIC2.49□□□□□ -2.01
TCRBV7S3A2A0A539 AC008121.3-201ENST00000618726 433 ntBASIC2.49□□□□□ -2.01
TCRBV7S3A2A0A539 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.49□□□□□ -2.01
TCRBV7S3A2A0A539 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 RNU5F-3P-201ENST00000363767 117 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 RNY3P4-201ENST00000384428 101 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 Y_RNA.526-201ENST00000384572 110 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 RNU6-985P-201ENST00000410182 104 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 WARS2P1-201ENST00000429678 537 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 AC092427.1-202ENST00000430569 476 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 AL445687.1-201ENST00000439946 251 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 AL161788.1-201ENST00000441805 169 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 CYP2C59P-201ENST00000457790 269 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 snoU13.22-201ENST00000459428 104 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 AC022616.4-201ENST00000522985 181 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 HSBP1P1-201ENST00000555205 166 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 AC090616.3-201ENST00000582184 217 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 SNRPGP20-201ENST00000604477 205 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 AC005000.2-201ENST00000605468 310 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 PART1_1.1-201ENST00000611761 217 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 AC006386.2-201ENST00000624491 75 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 AC012005.1-201ENST00000624575 75 ntBASIC2.48□□□□□ -2.01
TCRBV7S3A2A0A539 Y_RNA.27-201ENST00000362540 103 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 RNU6-1301P-201ENST00000362724 104 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 Y_RNA.145-201ENST00000363527 102 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 SNORA80A-201ENST00000363922 136 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 RNA5SP240-201ENST00000365355 128 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 SNORD14.1-201ENST00000365609 90 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 MIR628-201ENST00000385229 95 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 FO393413.1-201ENST00000402892 195 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 Y_RNA.597-201ENST00000410463 100 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 RN7SKP282-201ENST00000516824 299 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 EIF4BP1-201ENST00000554881 351 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 UBL5P4-201ENST00000562584 236 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 MIR4319-201ENST00000577285 85 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 AC125232.2-201ENST00000592457 143 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 AL360085.1-201ENST00000604713 532 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 AC116312.1-201ENST00000606841 314 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 AC005296.1-201ENST00000616145 209 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 AL162373.1-201ENST00000620433 407 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 AC090517.3-201ENST00000625170 141 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 Z82209.1-201ENST00000422141 2135 ntBASIC2.47□□□□□ -2.01
TCRBV7S3A2A0A539 ZNF204P-201ENST00000416749 2397 ntBASIC2.46□□□□□ -2.01
TCRBV7S3A2A0A539 ZNF72P-201ENST00000425869 1908 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 AC062016.1-201ENST00000355719 319 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-944P-201ENST00000364023 107 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 Y_RNA.424-201ENST00000384063 103 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-823P-201ENST00000391042 103 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 SNORA12-201ENST00000391162 147 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 MIR320B2-201ENST00000408479 138 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-56P-201ENST00000516986 93 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 SNORA48.11-201ENST00000517015 89 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 AC005034.5-201ENST00000604219 466 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 AL449363.1-201ENST00000617815 186 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 AC005562.2-201ENST00000618264 111 ntBASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.46□□□□□ -2.02
TCRBV7S3A2A0A539 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 RNU1-62P-201ENST00000362599 164 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-873P-201ENST00000363833 107 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 Y_RNA.380-201ENST00000365663 111 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 Y_RNA.455-201ENST00000384230 98 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-318P-201ENST00000384283 103 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-327P-201ENST00000516270 127 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-1045P-201ENST00000516321 107 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-764P-201ENST00000516396 105 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 RN7SKP49-201ENST00000516675 260 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 RNA5SP402-201ENST00000517148 110 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 HSPE1P18-201ENST00000517602 280 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 AC022868.1-201ENST00000517767 391 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 DEFB131C-201ENST00000528817 165 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms