Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC022202.1-201ENST00000613515 211 ntBASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MTND4P1-201ENST00000457501 1466 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-137P-201ENST00000363680 108 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU1-91P-201ENST00000364746 163 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 SNORD116-29-201ENST00000384516 83 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MTCYBP4-201ENST00000401524 249 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL355497.1-201ENST00000406262 551 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MIR1262-201ENST00000408276 93 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 Y_RNA.646-201ENST00000410980 101 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 Z92545.1-201ENST00000411782 234 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 MTCO3P29-201ENST00000432119 779 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC097473.1-201ENST00000508142 408 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 ATP5EP1-201ENST00000510257 156 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU7-175P-201ENST00000515915 61 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 SCARNA16.2-201ENST00000516520 172 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNU6-307P-201ENST00000516743 106 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 RNA5SP54-201ENST00000516951 92 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC026271.5-201ENST00000577873 130 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 7SK.7-201ENST00000603504 247 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 Y_RNA.804-201ENST00000615262 101 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC005562.2-201ENST00000618264 111 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC012640.5-201ENST00000623897 319 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AC112487.2-201ENST00000637950 304 ntBASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRBV4-1A0A0J9YWV2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNY1P16-201ENST00000363063 111 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.356-201ENST00000365475 113 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORA18.2-201ENST00000383865 132 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.384-201ENST00000383909 102 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.405-201ENST00000383979 100 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.451-201ENST00000384200 100 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.524-201ENST00000384564 100 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.561-201ENST00000384694 100 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MT-TD-201ENST00000387419 68 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORA75.6-201ENST00000391318 127 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC027124.2-201ENST00000428249 105 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 HMGN2P18-201ENST00000450680 270 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC079804.2-201ENST00000490376 200 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC093259.1-201ENST00000509755 300 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MTND3P22-201ENST00000510932 243 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-1198P-201ENST00000516904 67 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-58P-201ENST00000517143 103 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORD53-201ENST00000579969 78 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL117336.2-201ENST00000602435 335 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 TCL6_2.1-201ENST00000615162 119 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL359314.1-201ENST00000616913 261 ntBASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL136360.1-201ENST00000503377 1900 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL596028.1-201ENST00000326971 197 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-743P-201ENST00000364151 106 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-867P-201ENST00000364956 107 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.319-201ENST00000365138 92 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.332-201ENST00000365271 113 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR549A-201ENST00000385268 96 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNY4P36-201ENST00000391116 96 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RN7SKP284-201ENST00000411002 343 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC004866.1-201ENST00000411748 78 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MTCO3P10-201ENST00000455912 772 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 ELOCP24-201ENST00000456370 334 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.632-201ENST00000459189 102 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 TOMM22P6-201ENST00000465035 409 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RPS23P5-201ENST00000495419 428 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU2-44P-201ENST00000516795 194 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.718-201ENST00000517110 102 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNA5SP490-201ENST00000517141 136 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RAB11AP2-201ENST00000545905 639 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC093027.1-201ENST00000546698 429 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL031274.2-201ENST00000599419 203 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNRPGP20-201ENST00000604477 205 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC100812.1-201ENST00000607622 580 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MTND4LP32-201ENST00000636111 270 ntBASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV4-1A0A0J9YWV2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.99-201ENST00000363138 105 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU4-73P-201ENST00000363164 141 ntBASIC1.88□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU5E-4P-201ENST00000364931 120 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms