Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LOC102724428A0A0B4J2F2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.14□□□□□ -1.75
LOC102724428A0A0B4J2F2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LOC102724428A0A0B4J2F2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LOC102724428A0A0B4J2F2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU1-62P-201ENST00000362599 164 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-727P-201ENST00000363592 107 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-275P-201ENST00000364910 107 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNA5SP126-201ENST00000365092 109 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-622P-201ENST00000384272 103 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 SNORA54-201ENST00000384281 123 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-763P-201ENST00000390865 106 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 HSPE1P26-201ENST00000405341 275 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNA5SP229-201ENST00000410809 99 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC126124.2-201ENST00000413542 321 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC096649.2-201ENST00000416186 393 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 VDAC1P3-201ENST00000434069 851 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 CR769767.1-201ENST00000436337 346 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 U8.19-201ENST00000459095 133 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU7-121P-201ENST00000516604 62 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC021739.1-201ENST00000559631 174 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC012531.5-201ENST00000611375 151 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 uc_338.32-201ENST00000615087 172 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC010332.2-201ENST00000613083 1904 ntBASIC4.13□□□□□ -1.75
LOC102724428A0A0B4J2F2 FAM35BP-202ENST00000497389 3337 ntBASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNA5SP205-201ENST00000364653 136 ntBASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 MIR320B2-201ENST00000408479 138 ntBASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 RPS4XP2-201ENST00000458402 793 ntBASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-436P-201ENST00000516171 114 ntBASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 CYP4A27P-201ENST00000567218 190 ntBASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 uc_338.1-201ENST00000612113 180 ntBASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LOC102724428A0A0B4J2F2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-600P-201ENST00000362524 99 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-487P-201ENST00000365430 104 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 SNORA18.3-201ENST00000384122 132 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 MIR3074-201ENST00000384885 81 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 SNORA40-201ENST00000388090 126 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 U3.40-201ENST00000408706 208 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 EBAG9P1-201ENST00000418955 543 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC115990.1-201ENST00000526957 301 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC100767.1-201ENST00000528178 123 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 SNRPGP20-201ENST00000604477 205 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 MIR486-1-201ENST00000612171 68 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 CUL1P1-201ENST00000509510 2425 ntBASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
LOC102724428A0A0B4J2F2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-324P-201ENST00000363957 106 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 Y_RNA.261-201ENST00000364631 102 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 Y_RNA.353-201ENST00000365440 108 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-381P-201ENST00000391259 108 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 BPY2DP-201ENST00000422208 265 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 RN7SL93P-201ENST00000463035 293 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 RPL23AP67-201ENST00000465341 474 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 ACA59.2-201ENST00000517061 156 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU2-12P-201ENST00000517216 168 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 MIR4431-201ENST00000579990 94 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC018555.1-201ENST00000567548 1980 ntBASIC4.1□□□□□ -1.75
LOC102724428A0A0B4J2F2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC017071.1-201ENST00000564407 2204 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 MIR449A-201ENST00000362113 91 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-50P-201ENST00000362356 103 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-801P-201ENST00000364087 105 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 MIR208B-201ENST00000401172 77 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 RN7SKP220-201ENST00000410611 288 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC099548.1-201ENST00000421443 426 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 RPS4XP13-201ENST00000483219 789 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 RNU6-928P-201ENST00000516876 104 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC021269.2-201ENST00000532318 330 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 MIR3690-201ENST00000580266 75 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 AL078604.3-201ENST00000615580 211 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 SNORD98-201ENST00000636377 67 ntBASIC4.09□□□□□ -1.75
LOC102724428A0A0B4J2F2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms