Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RNU1-76P-201ENST00000362903 159 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.461-201ENST00000384263 103 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 SNORA54-201ENST00000384281 123 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RNY3P4-201ENST00000384428 101 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-1093P-201ENST00000391194 107 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RPL21P3-201ENST00000395517 478 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-130P-201ENST00000411112 103 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 EIF1P2-201ENST00000428233 350 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 ARL5AP4-201ENST00000430731 512 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 AC146507.2-201ENST00000460608 476 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RPL23AP70-201ENST00000483361 460 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 SNORA25.11-201ENST00000515935 105 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RNA5SP356-201ENST00000515972 94 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RNY3P15-201ENST00000516297 97 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 RN7SKP282-201ENST00000516824 299 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 PCGEM1.1-201ENST00000613431 131 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 AC005296.1-201ENST00000616145 209 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 AC078938.1-201ENST00000620993 318 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 AC069528.2-201ENST00000624849 1991 ntBASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHB1Q9Y5F3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
PCDHB1Q9Y5F3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 SNORA71.1-201ENST00000364523 117 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.447-201ENST00000384184 113 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 SNORD67-201ENST00000390833 111 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 RNA5SP201-201ENST00000410316 124 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 RNU2-38P-201ENST00000410856 79 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 RN7SKP284-201ENST00000411002 343 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 U8.22-201ENST00000459141 133 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 RN7SL20P-201ENST00000488827 297 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 MTND1P19-201ENST00000511780 315 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 AC091826.1-201ENST00000514065 313 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-1143P-201ENST00000516125 104 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 RN7SKP43-201ENST00000516173 320 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-897P-201ENST00000517135 105 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 RNA5SP380-201ENST00000517190 98 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 HSPE1P20-201ENST00000538133 289 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 AC023157.2-201ENST00000540596 141 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 AC005357.1-201ENST00000588399 301 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 RPL30P11-203ENST00000598995 310 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 AL442067.1-201ENST00000613261 223 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 BX322639.1-202ENST00000423987 2213 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 AL035425.3-201ENST00000564206 4996 ntBASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDHB1Q9Y5F3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 FAM35CP-201ENST00000554755 2470 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-222P-201ENST00000362438 107 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 RNU4-15P-201ENST00000362613 141 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 U3.9-201ENST00000363823 204 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 SNORD21-201ENST00000383953 95 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-713P-201ENST00000384761 107 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 U6atac.2-201ENST00000408644 118 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-121P-201ENST00000410525 99 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 WARS2P1-201ENST00000429678 537 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 AC096638.1-201ENST00000444678 216 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 AC073910.1-201ENST00000445047 438 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-570P-201ENST00000517051 105 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 SCARNA3-201ENST00000517097 143 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 AC034114.1-201ENST00000520293 285 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 EIF4A1P12-201ENST00000551910 141 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 GTF3AP2-201ENST00000557014 266 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 SNRPGP20-201ENST00000604477 205 ntBASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHB1Q9Y5F3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AC073325.2-201ENST00000339545 159 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 MIR22-201ENST00000362190 85 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.19-201ENST00000362462 99 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-879P-201ENST00000364328 108 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.471-201ENST00000384312 102 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.477-201ENST00000384352 108 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.556-201ENST00000384677 113 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 MIR10B-201ENST00000385011 110 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 MIR29B2-201ENST00000385055 81 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 RNA5SP213-201ENST00000391031 106 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 RPL21P38-201ENST00000418090 167 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms