Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC023141.12-201ENST00000512399 199 ntBASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6-504P-201ENST00000516568 104 ntBASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6-1149P-201ENST00000516810 97 ntBASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 AC100770.1-201ENST00000532310 322 ntBASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 MIR7154-201ENST00000620673 73 ntBASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 MIR302B-201ENST00000362188 73 ntBASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 Y_RNA.466-201ENST00000384294 113 ntBASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 Y_RNA.593-201ENST00000410292 98 ntBASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 AC078918.1-201ENST00000498515 228 ntBASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 AP001781.1-201ENST00000530977 207 ntBASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 HIGD1AP1-201ENST00000550979 275 ntBASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 GNRHR2P1-201ENST00000555315 631 ntBASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 MIR6716-201ENST00000613413 80 ntBASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PCDHB3Q9Y5E6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6-50P-201ENST00000362356 103 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 SNORD32B-201ENST00000364460 84 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 RNU1-57P-201ENST00000384491 166 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 AC063976.3-201ENST00000426849 329 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 VDAC1P3-201ENST00000434069 851 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 RPS4XP11-201ENST00000446897 772 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 RPS26P28-201ENST00000470806 348 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 RN7SL807P-201ENST00000470923 297 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 AC096725.1-201ENST00000514266 313 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 RNA5SP468-201ENST00000516782 93 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 AC106785.1-201ENST00000565935 262 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 AC091178.1-203ENST00000584586 279 ntBASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB3Q9Y5E6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB3Q9Y5E6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB3Q9Y5E6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB3Q9Y5E6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB3Q9Y5E6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB3Q9Y5E6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB3Q9Y5E6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 Y_RNA.93-201ENST00000363066 109 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 RNU6-414P-201ENST00000363705 104 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 MIR607-201ENST00000385241 96 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 RNU6-972P-201ENST00000391208 107 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 MIR300-201ENST00000401138 83 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 SNORA11-201ENST00000408789 128 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 RNU6-57P-201ENST00000411348 103 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 RPEP3-201ENST00000425462 676 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 AC011998.1-201ENST00000433403 117 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 SCARNA10-201ENST00000459255 330 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 AC109327.1-201ENST00000471666 403 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 TRAV8-5-201ENST00000537369 341 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 MIR4753-201ENST00000585119 83 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 AC058791.1-201ENST00000608412 3198 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 AC016588.2-201ENST00000632484 3021 ntBASIC4.4□□□□□ -1.71
PCDHB3Q9Y5E6 Y_RNA.213-201ENST00000364178 111 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 RNA5SP509-201ENST00000364577 119 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 RNA5SP151-201ENST00000365632 117 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 MIR147B-201ENST00000390185 80 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 MIR1255A-201ENST00000408338 113 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 AC008134.1-201ENST00000420943 193 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 RNU6-830P-201ENST00000516353 107 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 SCARNA15-202ENST00000516881 127 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 AC022655.2-201ENST00000577280 318 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 AC006435.5-201ENST00000624486 112 ntBASIC4.39□□□□□ -1.71
PCDHB3Q9Y5E6 MIR3202-2-201ENST00000635980 79 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms