Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.24-201ENST00000362508 103 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 U3.8-201ENST00000363675 217 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.218-201ENST00000364218 104 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 U1.1-201ENST00000384101 164 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AL591034.1-201ENST00000407447 340 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 SNORA3.3-201ENST00000408712 125 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 MIR1183-201ENST00000408856 89 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AL365496.1-201ENST00000426885 215 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 HLA-N-201ENST00000437516 135 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 HMGN2P20-201ENST00000437531 273 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 RPL23AP58-201ENST00000440453 469 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AC114982.1-201ENST00000469402 321 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 SNORA25.12-201ENST00000516202 82 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 RNU6-971P-201ENST00000516920 106 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 MIR3945-201ENST00000581853 98 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AL359881.1-201ENST00000602916 267 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AL391903.3-201ENST00000612158 163 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AC007546.2-201ENST00000623996 360 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AC006386.2-201ENST00000624491 75 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AC012005.1-201ENST00000624575 75 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 U6.115-201ENST00000636045 103 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 AF117829.1-206ENST00000621883 3802 ntBASIC4.13□□□□□ -1.75
HCN4Q9Y3Q4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 SNORA60-201ENST00000362396 134 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 RNU6-1048P-201ENST00000364054 107 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 RNA5SP97-201ENST00000365006 84 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.341-201ENST00000365341 102 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 SNORD116-14-201ENST00000383894 92 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 SNORD116-17-201ENST00000383929 92 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 SNORD116-15-201ENST00000384445 92 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 SNORD116-19-201ENST00000384729 92 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.572-201ENST00000384757 98 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 RNA5SP293-201ENST00000410527 113 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 HMGN2P7-201ENST00000456186 273 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 RPL23AP97-201ENST00000568955 471 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 AC022655.2-201ENST00000577280 318 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 AL391813.1-201ENST00000603098 260 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCN4Q9Y3Q4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 AL353746.1-201ENST00000566293 6881 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.172-201ENST00000363765 102 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 SNORA18.2-201ENST00000383865 132 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 RNA5SP120-201ENST00000410900 112 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 RNU7-23P-201ENST00000459465 62 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 AC145146.1-201ENST00000496370 254 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 RNU6-1333P-201ENST00000516162 93 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 RNU6-453P-201ENST00000516819 85 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 AC008873.1-201ENST00000625051 138 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 MIR3658-201ENST00000636291 56 ntBASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
HCN4Q9Y3Q4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 AL049781.1-201ENST00000623195 3585 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 AC010889.1-201ENST00000566193 2666 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 RNU6-969P-201ENST00000383900 105 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 RNU6-144P-201ENST00000383951 107 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 RNU6-855P-201ENST00000410395 104 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 SNORA71B-202ENST00000439232 272 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 AP002884.2-201ENST00000471647 395 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 RNU1-117P-201ENST00000517041 158 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 AC025281.1-201ENST00000567026 265 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 AL160290.3-201ENST00000604869 165 ntBASIC4.1□□□□□ -1.75
HCN4Q9Y3Q4 AL138880.2-201ENST00000616214 239 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms