Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 AL009048.1-201ENST00000450437 298 ntBASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 AL133217.1-201ENST00000450980 425 ntBASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 RN7SKP49-201ENST00000516675 260 ntBASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 SUMO2P16-201ENST00000519475 264 ntBASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 DEFB131C-201ENST00000528817 165 ntBASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 TPRKBP2-201ENST00000565969 475 ntBASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 MIR4452-201ENST00000583004 71 ntBASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 AC021506.2-201ENST00000612354 169 ntBASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 AC027807.2-201ENST00000616099 408 ntBASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.65□□□□□ -2.31
HDGFL3Q9Y3E1 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-500P-201ENST00000362349 107 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 RNU4-79P-201ENST00000362764 141 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-1287P-201ENST00000362914 107 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 Y_RNA.367-201ENST00000365544 101 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-1060P-201ENST00000384664 107 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 MIR499A-201ENST00000384903 122 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 SNORD12-201ENST00000391002 90 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 RPL21P1-201ENST00000399532 476 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 HMGN2P34-201ENST00000437647 269 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 SNRPFP3-201ENST00000457792 225 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 UBE2V1P12-201ENST00000503954 474 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 AC022418.1-201ENST00000624118 445 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 U6.114-201ENST00000636407 96 ntBASIC0.64□□□□□ -2.31
HDGFL3Q9Y3E1 SNORD114-24-201ENST00000365029 72 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 RNU5E-5P-201ENST00000365379 116 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 Y_RNA.480-201ENST00000384364 102 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-1235P-201ENST00000384559 107 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-950P-201ENST00000384651 107 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-1054P-201ENST00000411293 104 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AL008987.1-201ENST00000415528 237 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AL356583.2-201ENST00000426536 280 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AC104850.1-201ENST00000435940 476 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 USP9YP12-201ENST00000450481 570 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-498P-201ENST00000459468 107 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 FABP5P5-201ENST00000515537 406 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 SNORA31.4-201ENST00000516049 129 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-948P-201ENST00000516374 107 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 SNORA25.17-201ENST00000517184 124 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AC103996.1-201ENST00000555468 102 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 MTCO2P2-201ENST00000591258 225 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AL929325.1-201ENST00000603096 117 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 AL078595.3-201ENST00000623815 1166 ntBASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.63□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-827P-201ENST00000365553 106 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-910P-201ENST00000390844 107 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC098592.1-201ENST00000419352 333 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC063976.4-201ENST00000421971 163 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC002429.1-201ENST00000437672 148 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 SNORD124-201ENST00000459577 104 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC079382.1-201ENST00000493346 557 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC010486.2-201ENST00000505572 483 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AK3P2-201ENST00000507976 429 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 SNORA31.2-201ENST00000516019 134 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 Y_RNA.676-201ENST00000516393 96 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 RNA5SP168-201ENST00000516642 112 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-197P-201ENST00000516680 100 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 RNU2-46P-201ENST00000517038 113 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC024995.1-201ENST00000523014 93 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AP003072.2-201ENST00000527756 676 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 MIR4775-201ENST00000581168 75 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 MTATP6P3-201ENST00000581686 676 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 MIR4753-201ENST00000585119 83 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC016727.2-201ENST00000603988 621 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC106800.4-201ENST00000614905 153 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.62□□□□□ -2.31
HDGFL3Q9Y3E1 AC008163.1-202ENST00000636004 2889 ntBASIC0.61□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-975P-201ENST00000384296 105 ntBASIC0.61□□□□□ -2.31
HDGFL3Q9Y3E1 RNU6-1031P-201ENST00000384773 107 ntBASIC0.61□□□□□ -2.31
HDGFL3Q9Y3E1 MIR608-201ENST00000384820 100 ntBASIC0.61□□□□□ -2.31
HDGFL3Q9Y3E1 RNA5SP109-201ENST00000391010 116 ntBASIC0.61□□□□□ -2.31
HDGFL3Q9Y3E1 AC011233.1-201ENST00000422812 283 ntBASIC0.61□□□□□ -2.31
HDGFL3Q9Y3E1 MTCO2P23-201ENST00000425216 680 ntBASIC0.61□□□□□ -2.31
HDGFL3Q9Y3E1 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms