Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SNORA19.2-201ENST00000516013 114 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 RNU6-405P-201ENST00000516637 110 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 SNORA59B-202ENST00000578183 701 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 AP005136.1-201ENST00000579765 429 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 AC092807.2-201ENST00000609367 243 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 Z99129.1-201ENST00000612510 255 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 AC005520.5-201ENST00000613926 164 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 AC083806.3-201ENST00000614016 455 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 AL136221.1-201ENST00000621449 509 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 RNU6-1085P-201ENST00000363576 107 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 RNU6-259P-201ENST00000383999 107 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 RPL21P111-201ENST00000418453 477 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 MRPS10P2-201ENST00000431226 381 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 AMD1P1-201ENST00000457220 922 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 PPP1R2P5-201ENST00000457256 603 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 U8.21-201ENST00000459536 136 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 RPS29P27-201ENST00000463711 170 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 AL163540.1-201ENST00000485382 386 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 SUMO2P18-201ENST00000518873 252 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 SUB1P4-201ENST00000566062 339 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 MIR4781-201ENST00000585250 76 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 OR5AK4P-201ENST00000635912 903 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 AL159152.1-201ENST00000635019 2587 ntBASIC1.5□□□□□ -2.17
NPIPA1Q9UND3 MIR424-201ENST00000362227 98 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 MIR126-201ENST00000362291 85 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 RNU6-545P-201ENST00000362681 104 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 Y_RNA.51-201ENST00000362725 102 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 Y_RNA.481-201ENST00000384373 102 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 RNU2-66P-201ENST00000410650 161 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 RNA5SP247-201ENST00000411181 105 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AP1B1P2-201ENST00000416196 106 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 MTCO3P46-201ENST00000425787 232 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 USP9YP28-201ENST00000435142 589 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AC091435.1-201ENST00000505442 584 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AC096745.1-201ENST00000509945 370 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 SNORD60.2-201ENST00000516883 86 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AL157687.1-201ENST00000554853 619 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AC016925.2-201ENST00000605108 242 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 AL512598.1-201ENST00000610158 273 ntBASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 FER-210ENST00000628534 558 ntTSL 5 BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
NPIPA1Q9UND3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 RNU1-76P-201ENST00000362903 159 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 RNU6-877P-201ENST00000383868 107 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 SNORA29-201ENST00000384183 140 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 SNORD116-2-201ENST00000384274 95 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 SNORD116-6-201ENST00000384711 96 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 MTCO3P40-201ENST00000392516 676 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 RNA5SP494-201ENST00000410653 129 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 AL359672.1-201ENST00000442302 409 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 AC007395.1-201ENST00000451333 677 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 AC016925.1-201ENST00000458303 298 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 AC010531.2-201ENST00000465012 153 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 AC092436.3-201ENST00000511788 257 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 RNU6-1332P-201ENST00000516666 104 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 RNU6-835P-201ENST00000516974 104 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 MRPS36P4-201ENST00000534436 298 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 HMGB1P33-201ENST00000563485 527 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 RPL17P51-201ENST00000605218 238 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 AC124864.2-201ENST00000624736 186 ntBASIC1.48□□□□□ -2.17
NPIPA1Q9UND3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms