Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC097463.2-201ENST00000421074 142 ntBASIC4.39□□□□□ -1.71
PCDHGC3Q9UN70 AC006011.1-201ENST00000442758 349 ntBASIC4.39□□□□□ -1.71
PCDHGC3Q9UN70 Y_RNA.690-201ENST00000516603 95 ntBASIC4.39□□□□□ -1.71
PCDHGC3Q9UN70 AC091178.2-201ENST00000584401 117 ntBASIC4.39□□□□□ -1.71
PCDHGC3Q9UN70 AL049861.1-201ENST00000603130 150 ntBASIC4.39□□□□□ -1.71
PCDHGC3Q9UN70 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.39□□□□□ -1.71
PCDHGC3Q9UN70 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGC3Q9UN70 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHGC3Q9UN70 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 RNU6-975P-201ENST00000384296 105 ntBASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 MIR93-201ENST00000385024 80 ntBASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 MIR1294-201ENST00000408503 142 ntBASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 AC025554.1-201ENST00000505641 188 ntBASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 AC097639.2-201ENST00000603159 172 ntBASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 RMST_8.1-201ENST00000610287 165 ntBASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGC3Q9UN70 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 DYNLT3P1-201ENST00000378574 347 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 RNA5SP239-201ENST00000410218 129 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 Y_RNA.630-201ENST00000411370 108 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 AC126124.2-201ENST00000413542 321 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 AC006028.1-201ENST00000438379 402 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 AC010531.2-201ENST00000465012 153 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 RPS26P45-201ENST00000471748 340 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 AC025445.1-201ENST00000502728 300 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 RNU7-143P-201ENST00000516781 65 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 AC107934.2-201ENST00000518653 310 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 uc_338.4-201ENST00000616635 176 ntBASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGC3Q9UN70 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 Y_RNA.35-201ENST00000362601 101 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RNA5SP513-201ENST00000364648 118 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RNU6-32P-201ENST00000383948 107 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RNU6-13P-201ENST00000384248 107 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RNU6-12P-201ENST00000384604 107 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RNU6-41P-201ENST00000384741 107 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 MIR181A2-201ENST00000384863 110 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RNU2-37P-201ENST00000410695 177 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 EIF4EP4-201ENST00000424916 578 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RN7SL604P-201ENST00000492589 296 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 SNORD77.4-201ENST00000516158 81 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 CYCSP29-201ENST00000533731 318 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 RN7SL600P-201ENST00000581811 299 ntBASIC4.36□□□□□ -1.71
PCDHGC3Q9UN70 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 AL133412.1-201ENST00000380194 2992 ntBASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 SNORD14D-201ENST00000384390 87 ntBASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 MIR513A2-201ENST00000385249 127 ntBASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 RNA5SP104-201ENST00000410989 118 ntBASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 AC008134.1-201ENST00000420943 193 ntBASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 MTATP6P21-201ENST00000440681 189 ntBASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 RNU6-948P-201ENST00000516374 107 ntBASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 MIR5684-201ENST00000585074 65 ntBASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 AC008555.8-201ENST00000623602 2168 ntBASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGC3Q9UN70 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGC3Q9UN70 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PCDHGC3Q9UN70 AP003122.5-201ENST00000527668 3766 ntBASIC4.34□□□□□ -1.71
PCDHGC3Q9UN70 Y_RNA.634-201ENST00000364811 113 ntBASIC4.34□□□□□ -1.71
PCDHGC3Q9UN70 RPL23AP48-201ENST00000406913 488 ntBASIC4.34□□□□□ -1.71
PCDHGC3Q9UN70 RNU6-57P-201ENST00000411348 103 ntBASIC4.34□□□□□ -1.71
PCDHGC3Q9UN70 AC004552.1-201ENST00000419089 348 ntBASIC4.34□□□□□ -1.71
PCDHGC3Q9UN70 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms