Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP25Q9UHP3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
USP25Q9UHP3 AC233981.2-201ENST00000611524 1614 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 AC092593.1-201ENST00000515413 1815 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 RNU1-76P-201ENST00000362903 159 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 RNA5SP374-201ENST00000362939 125 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 SNORD115-32-201ENST00000364079 82 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 RNU6-611P-201ENST00000384276 104 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 RNU6-1222P-201ENST00000384615 107 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 EIF4EP4-201ENST00000424916 578 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.19□□□□□ -1.9
USP25Q9UHP3 AP000705.1-201ENST00000454567 350 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 snoU13.30-201ENST00000458951 104 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 RPL30P12-201ENST00000474666 353 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 AIG1P1-201ENST00000503376 148 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.19□□□□□ -1.9
USP25Q9UHP3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 RNU6-408P-201ENST00000515910 100 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 AL442163.3-201ENST00000554110 156 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.19□□□□□ -1.9
USP25Q9UHP3 MIR3668-201ENST00000582138 75 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 AC062037.2-201ENST00000610137 73 ntBASIC3.19□□□□□ -1.9
USP25Q9UHP3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.19□□□□□ -1.9
USP25Q9UHP3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
USP25Q9UHP3 SNORA25.6-201ENST00000364121 118 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 U3.13-201ENST00000364804 214 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 RNU1-140P-201ENST00000365040 165 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 RNU6-1318P-201ENST00000365389 103 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 Y_RNA.396-201ENST00000383949 103 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 RNU6-968P-201ENST00000384076 107 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 MIR186-201ENST00000384988 86 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 RNU6-907P-201ENST00000390924 102 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 AL590556.1-201ENST00000423231 483 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 RPEP5-201ENST00000441137 268 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 AC107032.1-201ENST00000485945 480 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 AC132942.1-201ENST00000486753 483 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 ANXA2P1-201ENST00000505539 926 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 RNY3P15-201ENST00000516297 97 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 RNU6-1271P-201ENST00000517049 105 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.18□□□□□ -1.9
USP25Q9UHP3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.18□□□□□ -1.9
USP25Q9UHP3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.18□□□□□ -1.9
USP25Q9UHP3 MIR4325-201ENST00000583049 90 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 AL449363.1-201ENST00000617815 186 ntBASIC3.18□□□□□ -1.9
USP25Q9UHP3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.18□□□□□ -1.9
USP25Q9UHP3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP25Q9UHP3 RNU6-212P-201ENST00000362642 104 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 RNU6-529P-201ENST00000363383 104 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 RNU6-17P-201ENST00000384245 107 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 Y_RNA.471-201ENST00000384312 102 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 RNY3P4-201ENST00000384428 101 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 RNU6-18P-201ENST00000384527 107 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 Y_RNA.518-201ENST00000384552 113 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.17□□□□□ -1.9
USP25Q9UHP3 Z82188.1-201ENST00000436709 154 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.17□□□□□ -1.9
USP25Q9UHP3 RPL23AP75-201ENST00000491601 451 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 AC025465.3-201ENST00000510570 311 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.17□□□□□ -1.9
USP25Q9UHP3 RNU6-897P-201ENST00000517135 105 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 MRPS36P4-201ENST00000534436 298 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 AP002770.2-201ENST00000543613 532 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 AC010928.2-201ENST00000588017 287 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 AC125232.2-201ENST00000592457 143 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 RMST_6.1-201ENST00000611980 203 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 SNORA43.4-201ENST00000629559 138 ntBASIC3.17□□□□□ -1.9
USP25Q9UHP3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP25Q9UHP3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP25Q9UHP3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USP25Q9UHP3 Y_RNA.183-201ENST00000363882 113 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 RNU6-770P-201ENST00000363929 105 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 Y_RNA.476-201ENST00000384347 108 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 RNU6-220P-201ENST00000390919 107 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 RNU6-847P-201ENST00000411115 108 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 HMGN2P35-201ENST00000412164 270 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 CYCSP48-201ENST00000417124 323 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 SDAD1P3-201ENST00000427380 333 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 AC022018.1-201ENST00000430685 241 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 PCNPP5-201ENST00000452246 481 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 snoU13.14-201ENST00000459372 104 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 RPL30P1-201ENST00000488676 339 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 AC091874.1-201ENST00000511402 339 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 AC067942.3-201ENST00000512025 362 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 RNU2-53P-201ENST00000516257 147 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 SNORA40.15-201ENST00000516884 107 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 AC115990.1-201ENST00000526957 301 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 AC090617.3-201ENST00000573670 475 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 AC130454.1-201ENST00000622948 401 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.16□□□□□ -1.9
USP25Q9UHP3 AC009487.2-201ENST00000420969 6821 ntBASIC3.16□□□□□ -1.9
USP25Q9UHP3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.16□□□□□ -1.9
USP25Q9UHP3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
USP25Q9UHP3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
USP25Q9UHP3 RNU6-655P-201ENST00000362858 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms