Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.44□□□□□ -2.18
CHRNA9Q9UGM1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHRNA9Q9UGM1 RNU6-214P-201ENST00000384130 107 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 SNORA29-201ENST00000384183 140 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 SNORA36A-201ENST00000384221 132 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 RNU6-1235P-201ENST00000384559 107 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 RNU2-7P-201ENST00000410794 178 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AC099677.2-201ENST00000436385 175 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 HSPE1P9-201ENST00000440046 311 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 RNU6-498P-201ENST00000459468 107 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AC010486.3-201ENST00000511602 785 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AC104383.1-201ENST00000530297 370 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 SNRPGP20-201ENST00000604477 205 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AC068205.3-201ENST00000636385 468 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 MTND4P5-201ENST00000435821 1374 ntBASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.43□□□□□ -2.18
CHRNA9Q9UGM1 AC121333.1-201ENST00000567488 2709 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 RNU1-96P-201ENST00000364163 162 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 RNU4-55P-201ENST00000410731 137 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 SNRPEP10-201ENST00000420249 274 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 AL353193.1-201ENST00000421444 268 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 AL591806.2-201ENST00000433122 173 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 AP005597.4-201ENST00000526762 229 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 RAB11AP2-201ENST00000545905 639 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 AP001485.1-201ENST00000604799 199 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 AC009509.4-201ENST00000619202 509 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 BX322639.1-202ENST00000423987 2213 ntBASIC1.42□□□□□ -2.18
CHRNA9Q9UGM1 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 RNU6-862P-201ENST00000362804 105 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 SNORA18.2-201ENST00000383865 132 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 RNU6-38P-201ENST00000384085 107 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 RNU6-439P-201ENST00000384188 106 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 SNORD37.1-201ENST00000390968 65 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 EIF4E2P1-201ENST00000393781 255 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AL117342.1-201ENST00000404861 406 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AC245047.4-201ENST00000433189 144 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AC009237.7-201ENST00000447357 229 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 HSPE1P24-201ENST00000450782 238 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 SNORD13-201ENST00000459299 104 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AC091435.1-201ENST00000505442 584 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 RNA5SP401-201ENST00000515920 127 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 RNU6-323P-201ENST00000521915 107 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AC084364.2-201ENST00000546924 395 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AL157687.1-201ENST00000554853 619 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 MIR4298-201ENST00000584380 73 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AC092747.3-201ENST00000603769 301 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AC245008.1-201ENST00000608123 476 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 MIR8076-201ENST00000611401 83 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
CHRNA9Q9UGM1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 MIR302D-201ENST00000362275 68 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 RNU6-877P-201ENST00000383868 107 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 RNY3P9-201ENST00000384727 106 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 SNORD73A-201ENST00000386062 65 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AC068050.1-201ENST00000394891 380 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 RNA5SP494-201ENST00000410653 129 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 RN7SKP51-201ENST00000410781 304 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AMD1P1-201ENST00000457220 922 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 RPS26P55-201ENST00000471178 356 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AC010424.1-201ENST00000506336 297 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AC011406.1-201ENST00000512440 370 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 CPDP1-201ENST00000579660 283 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 CTHRC1P1-201ENST00000605383 469 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AL121890.5-201ENST00000620848 304 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 AC139792.3-201ENST00000623525 224 ntBASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.4□□□□□ -2.19
CHRNA9Q9UGM1 ICE2P2-201ENST00000483823 2787 ntBASIC1.39□□□□□ -2.19
CHRNA9Q9UGM1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CHRNA9Q9UGM1 RNU6-271P-201ENST00000363858 105 ntBASIC1.39□□□□□ -2.19
CHRNA9Q9UGM1 RNU6-975P-201ENST00000384296 105 ntBASIC1.39□□□□□ -2.19
CHRNA9Q9UGM1 RNU6-784P-201ENST00000384330 106 ntBASIC1.39□□□□□ -2.19
CHRNA9Q9UGM1 MIR586-201ENST00000385035 97 ntBASIC1.39□□□□□ -2.19
CHRNA9Q9UGM1 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
CHRNA9Q9UGM1 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms