Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.65□□□□□ -2.15
SPASTQ9UBP0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.65□□□□□ -2.15
SPASTQ9UBP0 MIR5094-201ENST00000578766 85 ntBASIC1.65□□□□□ -2.15
SPASTQ9UBP0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.65□□□□□ -2.15
SPASTQ9UBP0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.65□□□□□ -2.15
SPASTQ9UBP0 AC245060.5-201ENST00000610778 3293 ntBASIC1.65□□□□□ -2.15
SPASTQ9UBP0 Y_RNA.381-201ENST00000365666 102 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 RNU6-338P-201ENST00000383888 105 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 SNORA69-201ENST00000383895 132 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SPASTQ9UBP0 FGF7P8-201ENST00000402994 292 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.64□□□□□ -2.15
SPASTQ9UBP0 EBAG9P1-201ENST00000418955 543 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AL359672.1-201ENST00000442302 409 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SPASTQ9UBP0 RPL9P9-202ENST00000466501 579 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AC104581.2-201ENST00000572227 430 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AC069114.2-201ENST00000604699 304 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AC016925.2-201ENST00000605108 242 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 snoU13.31-201ENST00000607291 104 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AL357078.3-201ENST00000607528 618 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AC245008.1-201ENST00000608123 476 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AC083806.3-201ENST00000614016 455 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AL159152.1-201ENST00000635019 2587 ntBASIC1.64□□□□□ -2.15
SPASTQ9UBP0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.64□□□□□ -2.15
SPASTQ9UBP0 AC006026.1-201ENST00000444025 1803 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SPASTQ9UBP0 MIR126-201ENST00000362291 85 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 RNU6-214P-201ENST00000384130 107 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 RPL21P111-201ENST00000418453 477 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 USP9YP28-201ENST00000435142 589 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 UBE2V1P8-201ENST00000437166 265 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.63□□□□□ -2.15
SPASTQ9UBP0 TPT1P7-201ENST00000458300 517 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 AC010531.2-201ENST00000465012 153 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 HMGN1P13-201ENST00000505795 138 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 SNORA19.2-201ENST00000516013 114 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 RNU2-34P-201ENST00000516534 121 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 AC025423.5-201ENST00000550230 219 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 MIR3611-201ENST00000584484 83 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 AC064836.2-201ENST00000609491 462 ntBASIC1.63□□□□□ -2.15
SPASTQ9UBP0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SPASTQ9UBP0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.63□□□□□ -2.15
SPASTQ9UBP0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
SPASTQ9UBP0 RNU6-414P-201ENST00000363705 104 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 RNU6-296P-201ENST00000384608 107 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 MIR520A-201ENST00000384862 85 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SPASTQ9UBP0 RNU4-62P-201ENST00000410125 130 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 BTF3P4-201ENST00000418852 495 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 FTH1P12-201ENST00000432137 551 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 RNU6-1208P-201ENST00000459588 107 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 SRRM1P2-201ENST00000464531 1192 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 AC067942.3-201ENST00000512025 362 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 RPL39P5-202ENST00000512505 151 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 RNU6-405P-201ENST00000516637 110 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.62□□□□□ -2.15
SPASTQ9UBP0 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.62□□□□□ -2.15
SPASTQ9UBP0 AL157687.1-201ENST00000554853 619 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 SNORD53B-201ENST00000577887 78 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.62□□□□□ -2.15
SPASTQ9UBP0 AP005136.1-201ENST00000579765 429 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 FGF7P1-201ENST00000582820 288 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 MIR5692C1-201ENST00000585309 91 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 AC005562.2-201ENST00000618264 111 ntBASIC1.62□□□□□ -2.15
SPASTQ9UBP0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.61□□□□□ -2.15
SPASTQ9UBP0 RNU6-1085P-201ENST00000363576 107 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 Y_RNA.378-201ENST00000365652 113 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.61□□□□□ -2.15
SPASTQ9UBP0 RNU6-1286P-201ENST00000383871 107 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 SNORA29-201ENST00000384183 140 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 EIF4E2P1-201ENST00000393781 255 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 TIMM9P3-201ENST00000428659 274 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 MTND3P9-201ENST00000429526 346 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 AC096745.1-201ENST00000509945 370 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 RNU6-1038P-201ENST00000516516 104 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 RNU6-856P-201ENST00000516959 98 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 AL118558.2-201ENST00000556294 238 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 MIR4303-201ENST00000581299 66 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 AC100830.2-201ENST00000581636 240 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 MIR4422-201ENST00000581938 83 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 AC010928.2-201ENST00000588017 287 ntBASIC1.61□□□□□ -2.15
SPASTQ9UBP0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.61□□□□□ -2.15
SPASTQ9UBP0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SPASTQ9UBP0 MTND5P26-201ENST00000426018 1752 ntBASIC1.6□□□□□ -2.15
SPASTQ9UBP0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SPASTQ9UBP0 RNU5B-2P-201ENST00000363036 113 ntBASIC1.6□□□□□ -2.15
SPASTQ9UBP0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.6□□□□□ -2.15
SPASTQ9UBP0 RNU6-1317P-201ENST00000364582 104 ntBASIC1.6□□□□□ -2.15
SPASTQ9UBP0 SNORA18.2-201ENST00000383865 132 ntBASIC1.6□□□□□ -2.15
SPASTQ9UBP0 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
SPASTQ9UBP0 RNU6-360P-201ENST00000390944 104 ntBASIC1.6□□□□□ -2.15
SPASTQ9UBP0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms