Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.51□□□□□ -1.85
USP35Q9P2H5 RNA5SP384-201ENST00000516615 116 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.51□□□□□ -1.85
USP35Q9P2H5 MIR4648-201ENST00000580107 72 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 AC005014.2-201ENST00000607795 599 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.51□□□□□ -1.85
USP35Q9P2H5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP35Q9P2H5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP35Q9P2H5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP35Q9P2H5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP35Q9P2H5 RNU5E-4P-201ENST00000364931 120 ntBASIC3.5□□□□□ -1.85
USP35Q9P2H5 RNU6-234P-201ENST00000365229 104 ntBASIC3.5□□□□□ -1.85
USP35Q9P2H5 MIR32-201ENST00000384965 70 ntBASIC3.5□□□□□ -1.85
USP35Q9P2H5 Y_RNA.604-201ENST00000410574 102 ntBASIC3.5□□□□□ -1.85
USP35Q9P2H5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.5□□□□□ -1.85
USP35Q9P2H5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.5□□□□□ -1.85
USP35Q9P2H5 Z82188.1-201ENST00000436709 154 ntBASIC3.5□□□□□ -1.85
USP35Q9P2H5 AC108210.2-201ENST00000503681 201 ntBASIC3.5□□□□□ -1.85
USP35Q9P2H5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.5□□□□□ -1.85
USP35Q9P2H5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.5□□□□□ -1.85
USP35Q9P2H5 AC090517.1-201ENST00000569307 266 ntBASIC3.5□□□□□ -1.85
USP35Q9P2H5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.5□□□□□ -1.85
USP35Q9P2H5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP35Q9P2H5 BX322639.1-202ENST00000423987 2213 ntBASIC3.5□□□□□ -1.85
USP35Q9P2H5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.49□□□□□ -1.85
USP35Q9P2H5 RNU1-76P-201ENST00000362903 159 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.49□□□□□ -1.85
USP35Q9P2H5 DEFA7P-201ENST00000382676 285 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
USP35Q9P2H5 SNORA12.2-201ENST00000391040 156 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 SNORA75.6-201ENST00000391318 127 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 AL357139.1-201ENST00000407792 426 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 MIR320B2-201ENST00000408479 138 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.49□□□□□ -1.85
USP35Q9P2H5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.49□□□□□ -1.85
USP35Q9P2H5 CR769767.1-201ENST00000436337 346 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 Y_RNA.653-201ENST00000459091 95 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 RNU6-965P-201ENST00000516721 96 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 RNU1-104P-201ENST00000517280 175 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 AC026271.5-201ENST00000577873 130 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 SNRPGP20-201ENST00000604477 205 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 MIR1248-201ENST00000629190 106 ntBASIC3.49□□□□□ -1.85
USP35Q9P2H5 RNY1P16-201ENST00000363063 111 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 RNU6-310P-201ENST00000384655 107 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 RN7SKP223-201ENST00000410582 62 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 Y_RNA.646-201ENST00000410980 101 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 SRIP3-201ENST00000413200 219 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 AL035666.1-201ENST00000446195 348 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 SCARNA16.2-201ENST00000516520 172 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 RNA5SP137-201ENST00000516833 135 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 DEFB122-202ENST00000569013 197 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 MIR3126-201ENST00000577443 74 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 AL117336.2-201ENST00000602435 335 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 AC100812.1-201ENST00000607622 580 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 AC005562.2-201ENST00000618264 111 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 AC112487.2-201ENST00000637950 304 ntBASIC3.48□□□□□ -1.85
USP35Q9P2H5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
USP35Q9P2H5 RNU6-331P-201ENST00000384724 107 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 RNY4P36-201ENST00000391116 96 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 MTCO2P27-201ENST00000420740 428 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 MTCYBP10-201ENST00000424905 650 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 SUMO1P4-201ENST00000429430 302 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.47□□□□□ -1.85
USP35Q9P2H5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 AL603825.1-201ENST00000438481 80 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 SNRPEP8-201ENST00000442866 260 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 AL139109.1-201ENST00000455491 297 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 ELOCP24-201ENST00000456370 334 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 SNORA4.4-201ENST00000515921 135 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.47□□□□□ -1.85
USP35Q9P2H5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.47□□□□□ -1.85
USP35Q9P2H5 RAB11AP2-201ENST00000545905 639 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.47□□□□□ -1.85
USP35Q9P2H5 MIR3605-201ENST00000583214 100 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 AC016727.2-201ENST00000603988 621 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 TCL6_2.1-201ENST00000615162 119 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 AL359697.1-201ENST00000624879 587 ntBASIC3.47□□□□□ -1.85
USP35Q9P2H5 ZNF271P-202ENST00000465539 1970 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 Y_RNA.48-201ENST00000362710 103 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 Y_RNA.259-201ENST00000364619 101 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 RNU1-91P-201ENST00000364746 163 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 Y_RNA.319-201ENST00000365138 92 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 RNU6-245P-201ENST00000384020 107 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 RNU6-700P-201ENST00000391043 107 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 EDDM3CP-201ENST00000415977 425 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 AC236972.2-201ENST00000434979 310 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 Y_RNA.632-201ENST00000459189 102 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 AC107032.1-201ENST00000485945 480 ntBASIC3.46□□□□□ -1.86
USP35Q9P2H5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms