Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNY1P4-201ENST00000384595 115 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 MTCYBP2-201ENST00000407745 171 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AL161935.2-201ENST00000414627 60 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC88CQ9P219 POLR2J4-204ENST00000418424 324 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC073614.1-201ENST00000438690 650 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC114982.1-201ENST00000469402 321 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AP002453.2-201ENST00000533503 320 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC040904.1-201ENST00000590850 223 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC245014.2-201ENST00000603689 287 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AL034555.1-201ENST00000604816 211 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC246785.4-201ENST00000605374 287 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 RMST_7.1-201ENST00000621935 268 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC095038.3-201ENST00000634439 195 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 RNU4-15P-201ENST00000362613 141 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 RNU6-1287P-201ENST00000362914 107 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 Y_RNA.367-201ENST00000365544 101 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 RNU6-1103P-201ENST00000384150 107 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 SNORA24.1-201ENST00000384401 135 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 RNU6-1060P-201ENST00000384664 107 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 BX295541.1-201ENST00000417774 250 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 CYCSP46-201ENST00000423569 204 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CCDC88CQ9P219 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC104850.1-201ENST00000435940 476 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC016925.1-201ENST00000458303 298 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 RPS29P15-201ENST00000458329 171 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 ZNF321P-202ENST00000550843 495 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 MIR4528-201ENST00000577763 90 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 MIR548AB-201ENST00000584917 84 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC073539.2-201ENST00000597113 165 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 MZT1P2-201ENST00000604387 248 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AL365434.2-201ENST00000607979 234 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AC006566.1-201ENST00000608943 513 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AL353149.1-201ENST00000610667 244 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.72□□□□□ -2.29
CCDC88CQ9P219 AL590240.4-201ENST00000616908 390 ntBASIC0.72□□□□□ -2.29
CCDC88CQ9P219 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC88CQ9P219 RNU6-1317P-201ENST00000364582 104 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 SNORA20.2-201ENST00000383922 131 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 RNU6-378P-201ENST00000384324 107 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 RNU2-66P-201ENST00000410650 161 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AL596276.1-201ENST00000434465 418 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC88CQ9P219 RPL26P26-201ENST00000480251 434 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 RNVU1-2-201ENST00000516326 135 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AC109479.2-201ENST00000517842 174 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AC090115.3-201ENST00000553218 849 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AC107304.1-201ENST00000604229 296 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AL022161.1-201ENST00000604390 213 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 PVT1_3.1-201ENST00000620853 95 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 OR5AK4P-201ENST00000635912 903 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 RPS29P13-201ENST00000402041 169 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 MTCO2P11-201ENST00000431069 680 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC88CQ9P219 HSPE1P13-201ENST00000451143 297 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.71□□□□□ -2.3
CCDC88CQ9P219 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 MTND1P24-201ENST00000552175 861 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AC009994.1-201ENST00000606889 253 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 MIR8063-201ENST00000621930 81 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 AC022513.1-201ENST00000624512 117 ntBASIC0.71□□□□□ -2.3
CCDC88CQ9P219 snoU2-30.2-201ENST00000362805 70 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNU4-41P-201ENST00000364426 143 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 SNORD31B-201ENST00000364977 69 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNU6-169P-201ENST00000365336 107 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNU6-17P-201ENST00000384245 107 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNU6-393P-201ENST00000384475 107 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNU6-18P-201ENST00000384527 107 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 MIR520A-201ENST00000384862 85 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 MIR194-1-201ENST00000384892 85 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 AL031577.2-201ENST00000404133 280 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNU2-9P-201ENST00000410194 145 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 ARL5AP1-201ENST00000418991 388 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC88CQ9P219 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC88CQ9P219 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.7□□□□□ -2.3
CCDC88CQ9P219 U8.21-201ENST00000459536 136 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 AC022447.4-201ENST00000504053 364 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 RNU6-229P-201ENST00000516614 102 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 AL356057.1-201ENST00000533798 831 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC88CQ9P219 AP003034.1-201ENST00000534621 422 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.7□□□□□ -2.3
CCDC88CQ9P219 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 Z99497.2-201ENST00000603634 310 ntBASIC0.7□□□□□ -2.3
CCDC88CQ9P219 AL121992.2-201ENST00000606262 256 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms