Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNY3-201ENST00000365484 102 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-890P-201ENST00000384121 107 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 MIR518C-201ENST00000384822 101 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RNA5SP184-201ENST00000411071 108 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RNU7-152P-201ENST00000458982 64 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RPL17P19-201ENST00000489069 552 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-1198P-201ENST00000516904 67 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RNA5SP54-201ENST00000516951 92 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RNA5SP402-201ENST00000517148 110 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 AC100812.1-201ENST00000607622 580 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-137P-201ENST00000363680 108 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.319-201ENST00000365138 92 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.405-201ENST00000383979 100 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.451-201ENST00000384200 100 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.524-201ENST00000384564 100 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.561-201ENST00000384694 100 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-700P-201ENST00000391043 107 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 MTCYBP10-201ENST00000424905 650 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 AC107032.1-201ENST00000485945 480 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 SNORA4.4-201ENST00000515921 135 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 MIR449C-201ENST00000516047 92 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.706-201ENST00000516933 99 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 AC027288.2-201ENST00000553028 243 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 C8orf59P2-201ENST00000603441 271 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 AC005562.2-201ENST00000618264 111 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 AC126177.8-201ENST00000618339 1015 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 AC092608.2-201ENST00000624427 218 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 MIR1248-201ENST00000629190 106 ntBASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC6A13Q9NSD5 BX322639.1-202ENST00000423987 2213 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AC062016.1-201ENST00000355719 319 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 RNU1-76P-201ENST00000362903 159 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 RNU1-91P-201ENST00000364746 163 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 RNU1-52P-201ENST00000384190 164 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 MIR487A-201ENST00000385009 80 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 CR769767.1-201ENST00000436337 346 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AL035666.1-201ENST00000446195 348 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AC108938.1-201ENST00000451204 136 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 TOMM22P6-201ENST00000465035 409 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 ANXA2P1-201ENST00000505539 926 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AC093303.1-201ENST00000514549 295 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AL355802.3-201ENST00000607571 545 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 MIR6895-201ENST00000613497 78 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AC084781.2-201ENST00000615568 161 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 ZNF271P-202ENST00000465539 1970 ntBASIC2.29□□□□□ -2.04
SLC6A13Q9NSD5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 SNORA18.2-201ENST00000383865 132 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-301P-201ENST00000384277 107 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.509-201ENST00000384506 99 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-541P-201ENST00000384709 110 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 AL357139.1-201ENST00000407792 426 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 MIR320B2-201ENST00000408479 138 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 AC063976.3-201ENST00000426849 329 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 AC027124.2-201ENST00000428249 105 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 AL109933.2-201ENST00000452651 260 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 AL139109.1-201ENST00000455491 297 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 AC022493.2-201ENST00000506122 481 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 RNU5F-4P-201ENST00000516581 114 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-264P-201ENST00000517134 104 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-58P-201ENST00000517143 103 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 DEFB131C-201ENST00000528817 165 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 AC004584.2-201ENST00000570407 410 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 MIR3126-201ENST00000577443 74 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 SNRPGP17-201ENST00000603780 214 ntBASIC2.28□□□□□ -2.04
SLC6A13Q9NSD5 SNRPGP20-201ENST00000604477 205 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms