Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 BPY2DP-201ENST00000422208 265 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 OOSP1P1-201ENST00000423265 274 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 AC078809.1-201ENST00000427601 140 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 MTCO1P5-201ENST00000433573 344 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 RPL39P29-201ENST00000447779 157 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 MRPS10P1-201ENST00000448483 130 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 CKS1BP7-201ENST00000522230 235 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 AC021231.3-201ENST00000558497 370 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 AC006001.4-201ENST00000622243 395 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 MIR3529-201ENST00000637713 78 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 AC092268.1-201ENST00000342691 405 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 RNU6-873P-201ENST00000363833 107 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 SNORA7.4-201ENST00000384249 137 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 RNU6-1140P-201ENST00000410517 106 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 POLR2KP2-201ENST00000438155 177 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 AC010401.1-201ENST00000463867 348 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 NDUFB9P3-201ENST00000521269 501 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 MIR4282-201ENST00000583613 67 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 AC005176.2-201ENST00000596933 147 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 AC072026.1-201ENST00000605023 201 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.57□□□□□ -1.84
PDLIM7Q9NR12 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.82-201ENST00000363000 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.92-201ENST00000363043 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.235-201ENST00000364412 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.306-201ENST00000365015 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.312-201ENST00000365089 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.322-201ENST00000365151 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.383-201ENST00000383855 97 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 RNU6-1289P-201ENST00000384431 106 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.595-201ENST00000410403 105 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 RN7SKP51-201ENST00000410781 304 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 RPL19P1-201ENST00000411635 428 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 AC012306.1-201ENST00000423267 114 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 AL714022.1-201ENST00000439897 151 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.650-201ENST00000459002 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.638-201ENST00000459374 113 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 AC091826.1-201ENST00000514065 313 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 SNORA27.4-201ENST00000516650 95 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.777-201ENST00000516982 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 ACA59.2-201ENST00000517061 156 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 AC006199.1-201ENST00000548728 219 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 GTF3AP2-201ENST00000557014 266 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 UBL5P2-201ENST00000583788 219 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.771-201ENST00000598668 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 RMST_8.1-201ENST00000610287 165 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 AC010999.1-201ENST00000611856 324 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.789-201ENST00000622480 102 ntBASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM7Q9NR12 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 AC110491.1-201ENST00000562191 2010 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 UBE2WP1-201ENST00000362030 340 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.136-201ENST00000363444 102 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 RNU6-1285P-201ENST00000363480 105 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 RNU6-799P-201ENST00000363567 107 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 SNORA54-201ENST00000384281 123 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 SNORA26.3-201ENST00000391119 136 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 RPL23AP36-201ENST00000413895 458 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 ARF4P2-201ENST00000430209 526 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 RN7SL330P-201ENST00000469709 307 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 RNU5F-8P-201ENST00000515941 111 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 RNU6-1278P-201ENST00000516130 107 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 RNA5SP54-201ENST00000516951 92 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 AC055872.1-201ENST00000570978 278 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms