Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-545P-201ENST00000362681 104 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-271P-201ENST00000363858 105 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 SNORA18.2-201ENST00000383865 132 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 TIMM9P3-201ENST00000428659 274 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 AC098826.2-201ENST00000452011 651 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 MTND3P16-201ENST00000452205 344 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 AC091435.1-201ENST00000505442 584 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 DEFB131C-201ENST00000528817 165 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 MRPS36P4-201ENST00000534436 298 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 SUB1P3-201ENST00000564581 315 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 MIR5692C1-201ENST00000585309 91 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 AC009994.1-201ENST00000606889 253 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 AP001330.5-201ENST00000607176 411 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 Z99129.1-201ENST00000612510 255 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 AC103705.1-201ENST00000619013 241 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 MIR7843-201ENST00000622274 79 ntBASIC1.19□□□□□ -2.22
EXOSC4Q9NPD3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 SNORD31B-201ENST00000364977 69 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 RNU1-78P-201ENST00000391248 165 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 CALM2P3-201ENST00000400429 449 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-174P-201ENST00000410406 106 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 RNU2-66P-201ENST00000410650 161 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 NCOR1P3-201ENST00000420479 303 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 MTCO1P44-201ENST00000441935 243 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 RNU1-131P-201ENST00000458943 161 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC083798.1-201ENST00000472671 131 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC099513.1-201ENST00000490423 301 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 RPS23P5-201ENST00000495419 428 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC025465.3-201ENST00000510570 311 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC092436.3-201ENST00000511788 257 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC087854.1-201ENST00000519706 414 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 SNORA77B-201ENST00000578179 125 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC005786.1-201ENST00000588553 154 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AL645939.4-201ENST00000604495 135 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 PRR13P7-201ENST00000605538 430 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC092807.2-201ENST00000609367 243 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 RMST_3.1-201ENST00000611651 109 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC083806.3-201ENST00000614016 455 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AC068205.3-201ENST00000636385 468 ntBASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
EXOSC4Q9NPD3 AL159152.1-201ENST00000635019 2587 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 Y_RNA.51-201ENST00000362725 102 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-227P-201ENST00000362865 103 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-112P-201ENST00000363599 104 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RNU4-13P-201ENST00000364019 141 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-259P-201ENST00000383999 107 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-418P-201ENST00000384035 107 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 SNORA29-201ENST00000384183 140 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-780P-201ENST00000391030 104 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RPL21P111-201ENST00000418453 477 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AC099677.2-201ENST00000436385 175 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 snoU13.9-201ENST00000458927 103 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AC010531.2-201ENST00000465012 153 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AC083904.1-201ENST00000487828 231 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-405P-201ENST00000516637 110 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-567P-201ENST00000516746 107 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-835P-201ENST00000516974 104 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 MIR4422-201ENST00000581938 83 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AC064807.4-201ENST00000607201 407 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 AC005520.5-201ENST00000613926 164 ntBASIC1.17□□□□□ -2.22
EXOSC4Q9NPD3 MIR26B-201ENST00000362251 77 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 MIR302D-201ENST00000362275 68 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-862P-201ENST00000362804 105 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 RNU1-76P-201ENST00000362903 159 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-82P-201ENST00000363970 107 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 RNU6-1322P-201ENST00000364309 107 ntBASIC1.16□□□□□ -2.22
EXOSC4Q9NPD3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms