Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 SNORA64.4-201ENST00000516632 81 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 AC007536.1-201ENST00000533382 349 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 MIR3144-201ENST00000579460 79 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 DEFB117-201ENST00000602356 141 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 AL356157.2-201ENST00000605122 111 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 U6.105-201ENST00000637379 88 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 AC092593.1-201ENST00000515413 1815 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 UBE2WP1-201ENST00000362030 340 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 SNORD56.3-201ENST00000363507 71 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 RNU6-799P-201ENST00000363567 107 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 MIR183-201ENST00000384958 110 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 MIR186-201ENST00000384988 86 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 SNORA46.1-201ENST00000391069 153 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 MIR208B-201ENST00000401172 77 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 MIR887-201ENST00000401258 79 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 MIR548I2-201ENST00000408348 149 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 RAB28P5-201ENST00000427490 651 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 TMSB4XP3-201ENST00000445144 114 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 AC005042.3-201ENST00000453230 174 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 RNU7-200P-201ENST00000516105 62 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 RNU6-155P-201ENST00000516347 100 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 RN7SKP282-201ENST00000516824 299 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 SNORA31.26-201ENST00000517250 137 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 AP002001.1-203ENST00000534002 267 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 AC090897.2-201ENST00000581715 130 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 AC022441.3-201ENST00000605737 136 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 AC073349.3-201ENST00000617616 186 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 AL365265.1-201ENST00000621045 234 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 MIR3199-2-201ENST00000636243 86 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 SNORD98-201ENST00000636377 67 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 CUL1P1-201ENST00000509510 2425 ntBASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
PCDH18Q9HCL0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AC092268.1-201ENST00000342691 405 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 Y_RNA.136-201ENST00000363444 102 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 RNU6-211P-201ENST00000384047 107 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AC078809.1-201ENST00000427601 140 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 HMGN2P20-201ENST00000437531 273 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AL161651.1-201ENST00000440882 223 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 RNU6-107P-201ENST00000516643 102 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 RNU6-1198P-201ENST00000516904 67 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AC016256.1-201ENST00000547971 354 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 MIR2682-201ENST00000580305 110 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AL133393.1-201ENST00000603277 287 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 HSPE1P7-201ENST00000604681 321 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AF117829.1-206ENST00000621883 3802 ntBASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDH18Q9HCL0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 AC002546.1-201ENST00000588041 2504 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 SNORD115-8-201ENST00000363856 82 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 Y_RNA.291-201ENST00000364886 113 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 SNORD115-38-201ENST00000365037 82 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 RNU6-622P-201ENST00000384272 103 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 AL357075.1-201ENST00000404107 726 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 AL591034.1-201ENST00000407447 340 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 ELOCP21-201ENST00000412558 336 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 AL390729.2-201ENST00000416137 156 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 SNORD2.1-201ENST00000458762 69 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 AC103975.1-201ENST00000482506 483 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 RNU6-191P-201ENST00000516295 94 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 AC245166.1-201ENST00000521012 253 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 CKS1BP7-201ENST00000522230 235 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 U6.106-201ENST00000636360 105 ntBASIC3.34□□□□□ -1.87
PCDH18Q9HCL0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.34□□□□□ -1.88
PCDH18Q9HCL0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms