Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 Y_RNA.222-201ENST00000364264 102 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.64□□□□□ -1.99
CDT1Q9H211 RNU6-1222P-201ENST00000384615 107 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 DPH3P2-201ENST00000422618 250 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 Z82188.1-201ENST00000436709 154 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.64□□□□□ -1.99
CDT1Q9H211 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.64□□□□□ -1.99
CDT1Q9H211 RPL36AP48-201ENST00000485521 314 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 AC015911.1-201ENST00000495111 156 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 Y_RNA.721-201ENST00000517207 102 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.64□□□□□ -1.99
CDT1Q9H211 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
CDT1Q9H211 GNAI2P1-201ENST00000541815 315 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 AP002770.2-201ENST00000543613 532 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.64□□□□□ -1.99
CDT1Q9H211 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.64□□□□□ -1.99
CDT1Q9H211 AC124312.5-201ENST00000604451 268 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 AC103810.6-201ENST00000606708 136 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 AC096772.1-201ENST00000609146 564 ntBASIC2.64□□□□□ -1.99
CDT1Q9H211 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.64□□□□□ -1.99
CDT1Q9H211 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 ZNF299P-201ENST00000406845 1804 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDT1Q9H211 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.63□□□□□ -1.99
CDT1Q9H211 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDT1Q9H211 Y_RNA.39-201ENST00000362620 98 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 SNORD114-19-201ENST00000363072 75 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 RNU6-806P-201ENST00000365147 105 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 Y_RNA.574-201ENST00000384766 95 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 RNU6-1109P-201ENST00000391187 107 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 RNU6-1328P-201ENST00000410938 106 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.63□□□□□ -1.99
CDT1Q9H211 AC092423.1-201ENST00000430165 186 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 RPS15AP7-201ENST00000439294 405 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.63□□□□□ -1.99
CDT1Q9H211 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDT1Q9H211 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.63□□□□□ -1.99
CDT1Q9H211 U8.22-201ENST00000459141 133 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 RN7SL636P-201ENST00000497504 294 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.63□□□□□ -1.99
CDT1Q9H211 HSPE1P4-201ENST00000550617 308 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 AC105137.2-201ENST00000569073 466 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 MIR4765-201ENST00000585007 77 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 MIR1291-201ENST00000627649 87 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.63□□□□□ -1.99
CDT1Q9H211 AC002543.1-201ENST00000299783 1954 ntBASIC2.63□□□□□ -1.99
CDT1Q9H211 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CDT1Q9H211 AL359854.1-201ENST00000614203 1594 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AP000560.1-201ENST00000624150 1937 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CDT1Q9H211 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDT1Q9H211 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.62□□□□□ -1.99
CDT1Q9H211 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CDT1Q9H211 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CDT1Q9H211 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CDT1Q9H211 OR56A5-201ENST00000340110 738 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 Y_RNA.40-201ENST00000362645 93 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 RNU6-1010P-201ENST00000362757 107 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 Y_RNA.214-201ENST00000364201 112 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 RNU6-1141P-201ENST00000364520 107 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 SNORD14.1-201ENST00000365609 90 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 RNU6-1083P-201ENST00000384022 107 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 Y_RNA.452-201ENST00000384202 108 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 RNU6-784P-201ENST00000384330 106 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.62□□□□□ -1.99
CDT1Q9H211 ELOCP20-201ENST00000422460 345 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 EIF4EP2-201ENST00000422816 654 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 RPL23AP95-201ENST00000426806 265 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.62□□□□□ -1.99
CDT1Q9H211 TRBV12-1-201ENST00000479785 344 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.62□□□□□ -1.99
CDT1Q9H211 MRPS35P2-201ENST00000508242 191 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.62□□□□□ -1.99
CDT1Q9H211 SCARNA11.3-201ENST00000517276 130 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC023442.1-201ENST00000531247 422 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC079598.5-201ENST00000547460 117 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.62□□□□□ -1.99
CDT1Q9H211 AC006600.1-201ENST00000572529 153 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC010928.2-201ENST00000588017 287 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC060766.3-201ENST00000591442 263 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC006006.1-201ENST00000603082 144 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC046143.2-201ENST00000609789 160 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 AC007792.1-201ENST00000623023 402 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDT1Q9H211 AC007336.1-201ENST00000576365 3828 ntBASIC2.62□□□□□ -1.99
CDT1Q9H211 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.62□□□□□ -1.99
CDT1Q9H211 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.61□□□□□ -1.99
CDT1Q9H211 Z75746.1-201ENST00000440243 2080 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.61□□□□□ -1.99
CDT1Q9H211 RNU6-212P-201ENST00000362642 104 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 RNU6-1285P-201ENST00000363480 105 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 Y_RNA.210-201ENST00000364161 110 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 U3.13-201ENST00000364804 214 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 Y_RNA.405-201ENST00000383979 100 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 Y_RNA.451-201ENST00000384200 100 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 Y_RNA.504-201ENST00000384481 104 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 Y_RNA.524-201ENST00000384564 100 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 Y_RNA.561-201ENST00000384694 100 ntBASIC2.61□□□□□ -1.99
CDT1Q9H211 RNU6-101P-201ENST00000410323 104 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms