Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RPL30P12-201ENST00000474666 353 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 RPS27P26-201ENST00000494583 239 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 SNORD19.2-201ENST00000516978 73 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 SNORA31.23-201ENST00000517219 133 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 AC016256.1-201ENST00000547971 354 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 MIR5680-201ENST00000577577 84 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 MIR4738-201ENST00000579134 87 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 MIR8057-201ENST00000620957 69 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 AC010889.1-201ENST00000566193 2666 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF38Q9H0F5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF38Q9H0F5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RNF38Q9H0F5 RNU4-80P-201ENST00000363200 141 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 RNA5SP139-201ENST00000364340 117 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 RNU6-1141P-201ENST00000364520 107 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 Y_RNA.595-201ENST00000410403 105 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 RNU6-394P-201ENST00000410735 107 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AC096649.2-201ENST00000416186 393 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AL358075.3-201ENST00000426289 226 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AC012308.1-201ENST00000451232 178 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 RN7SL504P-201ENST00000494496 287 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF38Q9H0F5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF38Q9H0F5 SNORA70.19-201ENST00000516717 90 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 CR383656.8-201ENST00000549046 145 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AL356157.2-201ENST00000605122 111 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AC010999.1-201ENST00000611856 324 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AL513302.2-201ENST00000562313 1842 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF38Q9H0F5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF38Q9H0F5 AC091564.4-201ENST00000533934 2194 ntBASIC3.48□□□□□ -1.85
RNF38Q9H0F5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF38Q9H0F5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 RNU6-525P-201ENST00000363685 104 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 RNU4-56P-201ENST00000364700 142 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 SNORA48.2-201ENST00000390926 124 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AL357075.1-201ENST00000404107 726 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 RNU6-1135P-201ENST00000411083 103 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AC244670.1-201ENST00000436879 112 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 IFNA11P-201ENST00000446352 526 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AC005042.3-201ENST00000453230 174 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 RNU6-625P-201ENST00000459412 107 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 RNU6-1198P-201ENST00000516904 67 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 ACA59.2-201ENST00000517061 156 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AC012493.2-201ENST00000595083 291 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AP001485.1-201ENST00000604799 199 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 AC110079.1-202ENST00000635213 138 ntBASIC3.47□□□□□ -1.85
RNF38Q9H0F5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF38Q9H0F5 CEP170P1-201ENST00000502249 4587 ntBASIC3.46□□□□□ -1.85
RNF38Q9H0F5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 RNU6-137P-201ENST00000363680 108 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 RNU6-19P-201ENST00000384718 107 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 RN7SKP61-201ENST00000410642 295 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 AL451074.5-201ENST00000415894 435 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 RPL39P29-201ENST00000447779 157 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 AC074133.1-201ENST00000515696 183 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 SNORA31.16-201ENST00000516773 139 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 AC091152.3-201ENST00000604227 325 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 AC005000.2-201ENST00000605468 310 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 AC022441.3-201ENST00000605737 136 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 MTND5P35-201ENST00000557537 1720 ntBASIC3.46□□□□□ -1.86
RNF38Q9H0F5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF38Q9H0F5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF38Q9H0F5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF38Q9H0F5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF38Q9H0F5 RBBP8P1-201ENST00000449447 1844 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 Y_RNA.101-201ENST00000363154 102 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 SNORD115-8-201ENST00000363856 82 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 Y_RNA.217-201ENST00000364214 105 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 Y_RNA.262-201ENST00000364641 102 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 SNORD115-38-201ENST00000365037 82 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms