Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 Y_RNA.500-201ENST00000384466 111 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 RPS27P16-201ENST00000425758 201 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 CST2P1-201ENST00000425770 87 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC069257.2-201ENST00000441819 155 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 TPTE2P5-203ENST00000458118 728 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 MTCO3P38-201ENST00000468910 766 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 BET1P1-201ENST00000482276 359 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC091435.1-201ENST00000505442 584 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 SNORA40.12-201ENST00000516329 111 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 RNA5SP384-201ENST00000516615 116 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC087854.1-201ENST00000519706 414 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC026470.2-201ENST00000561492 181 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 SUB1P3-201ENST00000564581 315 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC005668.1-201ENST00000571142 476 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 SNORD53B-201ENST00000577887 78 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AP003465.2-201ENST00000602571 373 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC073648.5-201ENST00000603502 305 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC064836.2-201ENST00000609491 462 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 MIR6845-201ENST00000613182 61 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC126177.8-201ENST00000618339 1015 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AL121890.5-201ENST00000620848 304 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SLIRPQ9GZT3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 Y_RNA.1-201ENST00000352915 104 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 SNORD33-201ENST00000362761 85 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 RNU6-60P-201ENST00000364792 103 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 MIR194-1-201ENST00000384892 85 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 AL606489.2-201ENST00000433886 234 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 RNU6-956P-201ENST00000458868 103 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 AC079140.2-201ENST00000506193 142 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 CENPUP1-201ENST00000526649 1202 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 SCOCP1-201ENST00000554676 349 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 AC015688.6-201ENST00000577737 104 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 AC016727.2-201ENST00000603988 621 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 AC007684.1-201ENST00000609671 477 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 AL359697.1-201ENST00000624879 587 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 MIR338-201ENST00000636369 67 ntBASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SLIRPQ9GZT3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 MTND3P9-201ENST00000429526 346 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 AC004386.2-201ENST00000441858 148 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 RNU6-498P-201ENST00000459468 107 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 U8.21-201ENST00000459536 136 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 AC091133.4-201ENST00000511142 308 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 RNU6-295P-201ENST00000516901 104 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 AP000873.5-201ENST00000533906 236 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 MIR3683-201ENST00000580847 82 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 MIR4753-201ENST00000585119 83 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 AC011494.1-201ENST00000596454 237 ntBASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.07□□□□□ -2.24
SLIRPQ9GZT3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 Y_RNA.111-201ENST00000363248 100 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 Y_RNA.381-201ENST00000365666 102 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 RNU6-975P-201ENST00000384296 105 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 RNA5SP494-201ENST00000410653 129 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 snoU13.27-201ENST00000459278 104 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 AC007215.1-201ENST00000464893 276 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 RPS3AP17-201ENST00000472594 777 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 RN7SKP298-201ENST00000515950 94 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 RNU6-948P-201ENST00000516374 107 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 RRN3P3-201ENST00000549207 578 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 AL118558.2-201ENST00000556294 238 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 AC008088.1-201ENST00000580993 280 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 FGF7P1-201ENST00000582820 288 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 MIR5006-201ENST00000583027 110 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 AC017083.3-201ENST00000609955 700 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 AL078604.3-201ENST00000615580 211 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 Z69908.1-201ENST00000622603 247 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 MTND5P35-201ENST00000557537 1720 ntBASIC1.06□□□□□ -2.24
SLIRPQ9GZT3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms