Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RNU2-64P-201ENST00000411315 191 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 RPS3AP3-201ENST00000411933 242 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AP000275.1-201ENST00000411943 390 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AC011233.1-201ENST00000422812 283 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AL593851.1-201ENST00000426171 157 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 TIMM9P3-201ENST00000428659 274 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.63□□□□□ -2.31
NKX6-2Q9C056 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 RNU6-498P-201ENST00000459468 107 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 SNORD124-201ENST00000459577 104 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 RNU6-1069P-201ENST00000516612 133 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 RNU6-922P-201ENST00000516753 99 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.63□□□□□ -2.31
NKX6-2Q9C056 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 MIR98-201ENST00000606724 119 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AC104458.1-201ENST00000608243 463 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.63□□□□□ -2.31
NKX6-2Q9C056 MIR6866-201ENST00000638146 69 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.63□□□□□ -2.31
NKX6-2Q9C056 AC009541.1-201ENST00000438279 2662 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 RNU1-17P-201ENST00000363022 152 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 RNA5SP126-201ENST00000365092 109 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 RNA5SP467-201ENST00000391274 118 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 RPL17P50-201ENST00000396131 546 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.62□□□□□ -2.31
NKX6-2Q9C056 RPL39P38-201ENST00000467018 153 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 MTATP6P9-201ENST00000515039 680 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 MIR5695-201ENST00000579717 85 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 MIR5006-201ENST00000583027 110 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 FAM71BP1-201ENST00000604431 523 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 AC004223.4-201ENST00000612426 332 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 AC106754.2-201ENST00000623006 233 ntBASIC0.62□□□□□ -2.31
NKX6-2Q9C056 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 RNU4-79P-201ENST00000362764 141 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 RNU6-1214P-201ENST00000363650 109 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 Y_RNA.287-201ENST00000364853 94 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC063976.4-201ENST00000421971 163 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 RAB28P5-201ENST00000427490 651 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC004386.2-201ENST00000441858 148 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 SCARNA18-201ENST00000459004 134 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC048334.1-201ENST00000477975 159 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 MTND2P14-201ENST00000482139 351 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 PDCD5P2-201ENST00000507570 312 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 RNA5SP168-201ENST00000516642 112 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC097065.2-201ENST00000608159 533 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 AC018630.2-201ENST00000534866 2403 ntBASIC0.61□□□□□ -2.31
NKX6-2Q9C056 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RNU6-108P-201ENST00000365558 107 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RNU6-975P-201ENST00000384296 105 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RNU6-505P-201ENST00000384427 107 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RNU6-1031P-201ENST00000384773 107 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 MIR19B1-201ENST00000384829 87 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 MIR1253-201ENST00000408273 105 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RNU4-62P-201ENST00000410125 130 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AC004866.1-201ENST00000411748 78 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.6□□□□□ -2.31
NKX6-2Q9C056 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.6□□□□□ -2.31
NKX6-2Q9C056 MTND3P3-201ENST00000505004 126 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.6□□□□□ -2.31
NKX6-2Q9C056 SNORA31.4-201ENST00000516049 129 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RNU6-1146P-201ENST00000516282 102 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RNU6-948P-201ENST00000516374 107 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 SNORA31.10-201ENST00000516482 106 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RN7SKP49-201ENST00000516675 260 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AC069113.1-201ENST00000517763 267 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 MIR3682-201ENST00000581338 84 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 RNU6-85P-201ENST00000605989 107 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AC006566.1-201ENST00000608943 513 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 AC022306.3-201ENST00000619930 550 ntBASIC0.6□□□□□ -2.31
NKX6-2Q9C056 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
NKX6-2Q9C056 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.59□□□□□ -2.31
NKX6-2Q9C056 RNU4-48P-201ENST00000365559 182 ntBASIC0.59□□□□□ -2.31
NKX6-2Q9C056 SNORD73A-201ENST00000386062 65 ntBASIC0.59□□□□□ -2.31
NKX6-2Q9C056 RNU11-5P-201ENST00000391216 129 ntBASIC0.59□□□□□ -2.31
NKX6-2Q9C056 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
NKX6-2Q9C056 RNU6-57P-201ENST00000411348 103 ntBASIC0.59□□□□□ -2.31
NKX6-2Q9C056 MTND3P17-201ENST00000416968 344 ntBASIC0.59□□□□□ -2.31
NKX6-2Q9C056 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.59□□□□□ -2.31
NKX6-2Q9C056 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.59□□□□□ -2.31
NKX6-2Q9C056 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.59□□□□□ -2.31
NKX6-2Q9C056 NFU1P2-201ENST00000448700 469 ntBASIC0.59□□□□□ -2.31
NKX6-2Q9C056 RNU6-197P-201ENST00000516680 100 ntBASIC0.59□□□□□ -2.31
NKX6-2Q9C056 MRPS36P3-201ENST00000519284 130 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms