Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 AC025754.2-201ENST00000606491 432 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 RMST_6.1-201ENST00000611980 203 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 LINC02555-201ENST00000563933 1951 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNU1-76P-201ENST00000362903 159 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-254P-201ENST00000363377 107 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNA5SP493-201ENST00000364115 91 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-1286P-201ENST00000383871 107 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 SNORA32.2-201ENST00000384049 122 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-933P-201ENST00000384424 107 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNA5SP212-201ENST00000391223 107 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 HSPE1P21-201ENST00000438283 308 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNU1-131P-201ENST00000458943 161 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 ATP5EP1-201ENST00000510257 156 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-720P-201ENST00000516363 108 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 RNU5F-4P-201ENST00000516581 114 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 AC026371.1-201ENST00000551867 419 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 MIR3169-201ENST00000578032 83 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 CPDP1-201ENST00000579660 283 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 MIR4713-201ENST00000582691 75 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 AF250324.2-201ENST00000608299 610 ntBASIC1.52□□□□□ -2.17
KLHDC3Q9BQ90 CBX3P1-201ENST00000325243 554 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.9-201ENST00000362354 101 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.38-201ENST00000362617 102 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.123-201ENST00000363338 102 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.318-201ENST00000365131 97 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-438P-201ENST00000365561 103 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.402-201ENST00000383972 102 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 SNORA29-201ENST00000384183 140 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.530-201ENST00000384587 101 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 RNA5SP501-201ENST00000410990 112 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 RPS26P42-201ENST00000413485 326 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 SNORD13-201ENST00000459299 104 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-1098P-201ENST00000516772 96 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 GNAI2P1-201ENST00000541815 315 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 ZNF519P2-201ENST00000557032 169 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 FGF7P1-201ENST00000582820 288 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 AC010928.2-201ENST00000588017 287 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 AC012557.2-201ENST00000605919 418 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 AC104458.1-201ENST00000608243 463 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 AL133215.3-201ENST00000609801 448 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 MIR8076-201ENST00000611401 83 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 AL590240.4-201ENST00000616908 390 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
KLHDC3Q9BQ90 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 RNU5B-2P-201ENST00000363036 113 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.100-201ENST00000363141 102 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 SNORD31B-201ENST00000364977 69 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.373-201ENST00000365600 103 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-968P-201ENST00000384076 107 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 SNORA48.1-201ENST00000390879 135 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-1093P-201ENST00000391194 107 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.615-201ENST00000410769 117 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 MTCO1P21-201ENST00000416634 589 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 AC016925.1-201ENST00000458303 298 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 snoU13.6-201ENST00000458785 104 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 RNU7-14P-201ENST00000459331 62 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 TOMM22P6-201ENST00000465035 409 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 AC022254.1-201ENST00000567857 235 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 MIR3618-201ENST00000580330 88 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 AC005786.1-201ENST00000588553 154 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 AC146944.4-201ENST00000602697 718 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.5□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-1090P-201ENST00000364065 94 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 SNORD114-6-201ENST00000364393 72 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 RNA5SP190-201ENST00000365222 118 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-784P-201ENST00000384330 106 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-1026P-201ENST00000384465 108 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 SNORD116-4-201ENST00000384733 96 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 MIR521-1-201ENST00000384902 87 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 SNORA17.3-201ENST00000391159 129 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 RNA5SP494-201ENST00000410653 129 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 AC009310.1-201ENST00000414414 451 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 USP9YP28-201ENST00000435142 589 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 SNRPEP8-201ENST00000442866 260 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 RNU7-66P-201ENST00000459469 62 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 RPS23P5-201ENST00000495419 428 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 AC096745.1-201ENST00000509945 370 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms