Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.82□□□□□ -2.12
SSX3Q99909 MIR1273D-201ENST00000577266 86 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 AP003465.2-201ENST00000602571 373 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.82□□□□□ -2.12
SSX3Q99909 AC019193.3-201ENST00000609144 554 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 MIR6766-201ENST00000622641 72 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 DUXAP9-208ENST00000622815 614 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SSX3Q99909 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SSX3Q99909 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SSX3Q99909 AC245060.5-201ENST00000610778 3293 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 MTND5P6-201ENST00000422338 1798 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 Y_RNA.332-201ENST00000365271 113 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 MIR221-201ENST00000385135 110 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SSX3Q99909 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.81□□□□□ -2.12
SSX3Q99909 MIR1261-201ENST00000408659 82 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 RNU6-1148P-201ENST00000410992 104 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.81□□□□□ -2.12
SSX3Q99909 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 DAP3P1-201ENST00000441522 278 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.81□□□□□ -2.12
SSX3Q99909 AC025033.1-201ENST00000463883 194 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 RPS23P5-201ENST00000495419 428 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 ACA59.1-201ENST00000515966 143 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 RNU1-40P-201ENST00000516816 164 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 RNU1-97P-201ENST00000516872 164 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 AC026464.5-201ENST00000562497 722 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 MIR4648-201ENST00000580107 72 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.81□□□□□ -2.12
SSX3Q99909 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.81□□□□□ -2.12
SSX3Q99909 AC002553.4-201ENST00000616896 331 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 U1.36-201ENST00000620684 176 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 AC006504.8-201ENST00000621046 635 ntBASIC1.81□□□□□ -2.12
SSX3Q99909 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.81□□□□□ -2.12
SSX3Q99909 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SSX3Q99909 SNORA18.2-201ENST00000383865 132 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 RNU6-1026P-201ENST00000384465 108 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 RNU6-831P-201ENST00000384548 107 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 RPS26P42-201ENST00000413485 326 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 AC123900.1-201ENST00000420390 96 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 AC027124.2-201ENST00000428249 105 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 SNRPEP8-201ENST00000442866 260 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.8□□□□□ -2.12
SSX3Q99909 AC096638.1-201ENST00000444678 216 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 TOMM22P6-201ENST00000465035 409 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 AC087477.1-201ENST00000465747 340 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 MTCO2P30-201ENST00000503662 364 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 GNAI2P1-201ENST00000541815 315 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX3Q99909 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX3Q99909 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX3Q99909 AC124303.1-201ENST00000605703 360 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX3Q99909 MIR6132-201ENST00000622083 109 ntBASIC1.8□□□□□ -2.12
SSX3Q99909 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX3Q99909 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SSX3Q99909 RNU1-76P-201ENST00000362903 159 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 RNU6-23P-201ENST00000363283 107 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 SNORA48.3-201ENST00000391081 134 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 SNORA11.4-201ENST00000408823 129 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 EIF4EP2-201ENST00000422816 654 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.79□□□□□ -2.12
SSX3Q99909 AC018634.1-201ENST00000437554 401 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.79□□□□□ -2.12
SSX3Q99909 RPL23AP7-203ENST00000449021 469 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 AF186996.7-201ENST00000492781 209 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 RPS29P21-201ENST00000496272 170 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 AC082651.2-201ENST00000496833 166 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.79□□□□□ -2.12
SSX3Q99909 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.79□□□□□ -2.12
SSX3Q99909 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.79□□□□□ -2.12
SSX3Q99909 MIR4713-201ENST00000582691 75 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 AC137590.2-201ENST00000619709 240 ntBASIC1.79□□□□□ -2.12
SSX3Q99909 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SSX3Q99909 LINC02555-201ENST00000563933 1951 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 SNORD50.1-201ENST00000362987 71 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 Y_RNA.86-201ENST00000363020 111 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 SNORD31B-201ENST00000364977 69 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.78□□□□□ -2.12
SSX3Q99909 NFU1P2-201ENST00000448700 469 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 OR2AQ1P-201ENST00000451972 200 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
SSX3Q99909 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.78□□□□□ -2.12
SSX3Q99909 RPL23AP75-201ENST00000491601 451 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.78□□□□□ -2.12
SSX3Q99909 RNU4-49P-201ENST00000516080 140 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 RNU6-1088P-201ENST00000516850 104 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.78□□□□□ -2.12
SSX3Q99909 AF235103.2-201ENST00000525753 346 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 AC026470.2-201ENST00000561492 181 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
SSX3Q99909 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.78□□□□□ -2.12
SSX3Q99909 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms