Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
SNX18Q96RF0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SNX18Q96RF0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX18Q96RF0 AL359854.1-201ENST00000614203 1594 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.76□□□□□ -1.97
SNX18Q96RF0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 RNU4-56P-201ENST00000364700 142 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 RNU6-1318P-201ENST00000365389 103 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 SNORD15B-201ENST00000384714 146 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 MIR186-201ENST00000384988 86 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 MIR549A-201ENST00000385268 96 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 U3.26-201ENST00000391236 204 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 RNU6-1001P-201ENST00000411265 100 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 snoU13.14-201ENST00000459372 104 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 HMGB1P35-201ENST00000503360 598 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 RNU2-53P-201ENST00000516257 147 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 AC023157.2-201ENST00000540596 141 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 AC079598.5-201ENST00000547460 117 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 MIR5004-201ENST00000579078 107 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 MIR4325-201ENST00000583049 90 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 MIR376A1-201ENST00000616574 68 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 AC010615.1-201ENST00000594254 1764 ntBASIC2.76□□□□□ -1.97
SNX18Q96RF0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX18Q96RF0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNX18Q96RF0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNX18Q96RF0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNX18Q96RF0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNX18Q96RF0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SNX18Q96RF0 RNU1-57P-201ENST00000384491 166 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 MIR215-201ENST00000384858 110 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 SNORD12B-201ENST00000410433 91 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 RNU2-38P-201ENST00000410856 79 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX18Q96RF0 SNORD127-201ENST00000458892 86 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 RNU6-1132P-201ENST00000459214 107 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 AC006445.1-201ENST00000491925 405 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX18Q96RF0 AC025465.3-201ENST00000510570 311 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 RNA5SP341-201ENST00000516261 117 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 Y_RNA.713-201ENST00000517013 96 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX18Q96RF0 AC004486.1-201ENST00000546846 233 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX18Q96RF0 MIR3670-2-201ENST00000582974 65 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 MIR3670-1-201ENST00000584160 65 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 MIR3670-3-201ENST00000584855 65 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 MIR4765-201ENST00000585007 77 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 MIR3670-4-201ENST00000612260 65 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX18Q96RF0 U6.104-201ENST00000637979 90 ntBASIC2.75□□□□□ -1.97
SNX18Q96RF0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SNX18Q96RF0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX18Q96RF0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.75□□□□□ -1.97
SNX18Q96RF0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SNX18Q96RF0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SNX18Q96RF0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SNX18Q96RF0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SNX18Q96RF0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX18Q96RF0 RNU6-379P-201ENST00000363813 104 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 Y_RNA.447-201ENST00000384184 113 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 RNU6-281P-201ENST00000384212 103 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 RNU6-1093P-201ENST00000391194 107 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 MIR208B-201ENST00000401172 77 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX18Q96RF0 AC097463.2-201ENST00000421074 142 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX18Q96RF0 RN7SL863P-201ENST00000462370 296 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 TRBVB-201ENST00000477100 408 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 RPL31P41-201ENST00000477967 372 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 RN7SL20P-201ENST00000488827 297 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX18Q96RF0 RNU6-1198P-201ENST00000516904 67 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX18Q96RF0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX18Q96RF0 CYP4A27P-201ENST00000567218 190 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 MIR4300-201ENST00000581016 96 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 AC008739.2-201ENST00000597006 317 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 AL034555.1-201ENST00000604816 211 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX18Q96RF0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 AP003122.5-201ENST00000527668 3766 ntBASIC2.74□□□□□ -1.97
SNX18Q96RF0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.73□□□□□ -1.97
SNX18Q96RF0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.73□□□□□ -1.97
SNX18Q96RF0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.73□□□□□ -1.97
SNX18Q96RF0 ZNF204P-201ENST00000416749 2397 ntBASIC2.73□□□□□ -1.97
SNX18Q96RF0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SNX18Q96RF0 AC073325.2-201ENST00000339545 159 ntBASIC2.73□□□□□ -1.97
SNX18Q96RF0 RNU6-655P-201ENST00000362858 107 ntBASIC2.73□□□□□ -1.97
SNX18Q96RF0 Y_RNA.84-201ENST00000363011 104 ntBASIC2.73□□□□□ -1.97
SNX18Q96RF0 Y_RNA.111-201ENST00000363248 100 ntBASIC2.73□□□□□ -1.97
SNX18Q96RF0 RNU6-137P-201ENST00000363680 108 ntBASIC2.73□□□□□ -1.97
SNX18Q96RF0 RNU6-873P-201ENST00000363833 107 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms