Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 C8orf59P1-201ENST00000429930 303 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 USP9YP28-201ENST00000435142 589 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 AL121601.2-201ENST00000438019 707 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.4□□□□□ -2.19
RPRD1AQ96P16 AC007395.1-201ENST00000451333 677 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.4□□□□□ -2.19
RPRD1AQ96P16 MTCO2P18-201ENST00000457151 658 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 snoU13.30-201ENST00000458951 104 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RPL26P26-201ENST00000480251 434 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RPS23P5-201ENST00000495419 428 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 AC098862.1-201ENST00000504991 413 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RNU6-612P-201ENST00000516909 102 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RNU6-323P-201ENST00000521915 107 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 HMGB1P33-201ENST00000563485 527 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 SUB1P3-201ENST00000564581 315 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 AC069114.2-201ENST00000604699 304 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 RPL17P51-201ENST00000605218 238 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.4□□□□□ -2.19
RPRD1AQ96P16 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RPRD1AQ96P16 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RPRD1AQ96P16 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
RPRD1AQ96P16 RNU6-271P-201ENST00000363858 105 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 MIR520A-201ENST00000384862 85 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 MIR548B-201ENST00000385247 97 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 RNU6-1093P-201ENST00000391194 107 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 AL606923.1-201ENST00000406616 190 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 MIR1267-201ENST00000408723 78 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 RPL30P13-201ENST00000418873 348 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.39□□□□□ -2.19
RPRD1AQ96P16 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.39□□□□□ -2.19
RPRD1AQ96P16 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.39□□□□□ -2.19
RPRD1AQ96P16 HSPE1P9-201ENST00000440046 311 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 RPS29P27-201ENST00000463711 170 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 AC091435.1-201ENST00000505442 584 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 SNORD60.2-201ENST00000516883 86 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 AP005597.4-201ENST00000526762 229 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.39□□□□□ -2.19
RPRD1AQ96P16 MIR4498-201ENST00000577599 66 ntBASIC1.39□□□□□ -2.19
RPRD1AQ96P16 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.39□□□□□ -2.19
RPRD1AQ96P16 MIR302D-201ENST00000362275 68 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 RNU6-545P-201ENST00000362681 104 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.38□□□□□ -2.19
RPRD1AQ96P16 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.38□□□□□ -2.19
RPRD1AQ96P16 JTBP1-201ENST00000441314 247 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 RNU6-956P-201ENST00000458868 103 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 HMGN2P9-201ENST00000476875 229 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 AL163540.1-201ENST00000485382 386 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 MTCYBP18-201ENST00000501056 747 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.38□□□□□ -2.19
RPRD1AQ96P16 HMGN1P13-201ENST00000505795 138 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RPRD1AQ96P16 AC010493.1-201ENST00000513479 292 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 AC073648.5-201ENST00000603502 305 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
RPRD1AQ96P16 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AC010615.1-201ENST00000594254 1764 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RPRD1AQ96P16 Y_RNA.255-201ENST00000364581 97 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 RNU6-877P-201ENST00000383868 107 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 RNU6-1106P-201ENST00000390845 107 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AL117342.1-201ENST00000404861 406 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AC004965.1-201ENST00000413033 213 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 MTCO1P21-201ENST00000416634 589 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AC099513.1-201ENST00000490423 301 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 RNA5SP445-201ENST00000515889 115 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 RNU6-1041P-201ENST00000516254 102 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 RNU6-856P-201ENST00000516959 98 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 RRN3P3-201ENST00000549207 578 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AC008269.2-201ENST00000561915 1105 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AC087683.1-201ENST00000591187 441 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AC064836.2-201ENST00000609491 462 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AC008147.4-201ENST00000617570 1204 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AC095038.3-201ENST00000634439 195 ntBASIC1.37□□□□□ -2.19
RPRD1AQ96P16 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RPRD1AQ96P16 AL391987.6-201ENST00000305671 199 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 RNU6-227P-201ENST00000362865 103 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 RNU1-96P-201ENST00000364163 162 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 ARL5AP1-201ENST00000418991 388 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AL606489.2-201ENST00000433886 234 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.36□□□□□ -2.19
RPRD1AQ96P16 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.36□□□□□ -2.19
RPRD1AQ96P16 RNU6-1037P-201ENST00000459571 107 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 MTCO3P38-201ENST00000468910 766 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 HMGB1P29-201ENST00000505659 499 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AC025465.4-201ENST00000513422 638 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 RNU6-189P-201ENST00000516120 101 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 RNU6-1038P-201ENST00000516516 104 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AC100821.1-201ENST00000523153 2479 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AC007834.2-201ENST00000536310 343 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AC084364.2-201ENST00000546924 395 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms