Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SNORD11B-201ENST00000607707 90 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AC068205.3-201ENST00000636385 468 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AL589743.1-201ENST00000551932 2712 ntBASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.16□□□□□ -1.74
CNTNAP3BQ96NU0 AC080128.1-201ENST00000474389 1917 ntBASIC4.15□□□□□ -1.74
CNTNAP3BQ96NU0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNTNAP3BQ96NU0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-788P-201ENST00000390967 104 ntBASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 SNORA57.3-201ENST00000411095 141 ntBASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 RPS29P4-201ENST00000414733 161 ntBASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 EIF4HP2-201ENST00000424380 563 ntBASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 AC069285.2-201ENST00000440210 275 ntBASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 RN7SL293P-201ENST00000481765 281 ntBASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.15□□□□□ -1.75
CNTNAP3BQ96NU0 AC002543.1-201ENST00000299783 1954 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 MIR448-201ENST00000362131 111 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 Y_RNA.17-201ENST00000362433 111 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 MIR624-201ENST00000385217 97 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 MIR208B-201ENST00000401172 77 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 RNA5SP490-201ENST00000517141 136 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 AC021739.1-201ENST00000559631 174 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 MIR3690-201ENST00000580266 75 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 MIR3136-201ENST00000583498 78 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 AC073308.1-201ENST00000623696 305 ntBASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.14□□□□□ -1.75
CNTNAP3BQ96NU0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 AL136360.1-201ENST00000503377 1900 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-674P-201ENST00000363831 107 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 DYNLT3P1-201ENST00000378574 347 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-1323P-201ENST00000384025 107 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-787P-201ENST00000384032 107 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 AC002075.2-201ENST00000425207 252 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 MTATP6P21-201ENST00000440681 189 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 AL645939.1-201ENST00000453429 797 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 AC022137.1-201ENST00000483735 151 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 RNA5SP236-201ENST00000516169 116 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-904P-201ENST00000516206 101 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-581P-201ENST00000516214 105 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 MIR5009-201ENST00000578736 100 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 U3.45-201ENST00000607547 219 ntBASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
CNTNAP3BQ96NU0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 MIR302B-201ENST00000362188 73 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 Y_RNA.91-201ENST00000363042 107 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 Y_RNA.634-201ENST00000364811 113 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-622P-201ENST00000384272 103 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 AC099548.1-201ENST00000421443 426 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 RPL39P39-201ENST00000455840 151 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-893P-201ENST00000458841 100 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-437P-201ENST00000459408 95 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 RPL23AP62-201ENST00000463396 453 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 RNA5SP367-201ENST00000516557 118 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms