Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC115Q96NT0 AL158032.1-201ENST00000605401 106 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 AC144521.1-201ENST00000607148 956 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.05□□□□□ -2.4
CCDC115Q96NT0 7SK.10-201ENST00000621414 298 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.05□□□□□ -2.4
CCDC115Q96NT0 RNU6-222P-201ENST00000362438 107 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 RNU6-43P-201ENST00000384302 107 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 Y_RNA.476-201ENST00000384347 108 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 MIR300-201ENST00000401138 83 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 RNA5SP222-201ENST00000411039 105 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 AC019070.1-201ENST00000415008 1024 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 MTND4P3-201ENST00000417829 541 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 AC244098.3-201ENST00000424803 96 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 AC010975.2-201ENST00000427781 588 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 USP9YP28-201ENST00000435142 589 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 HMGN2P34-201ENST00000437647 269 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC115Q96NT0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.04□□□□□ -2.4
CCDC115Q96NT0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC115Q96NT0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC115Q96NT0 SUB1P2-201ENST00000556401 297 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.04□□□□□ -2.4
CCDC115Q96NT0 MTND1P15-201ENST00000579262 949 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 MIR7111-201ENST00000619751 72 ntBASIC0.04□□□□□ -2.4
CCDC115Q96NT0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
CCDC115Q96NT0 RNU4-48P-201ENST00000365559 182 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 MIR660-201ENST00000385235 97 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 RNA5SP323-201ENST00000391094 133 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 MIR1295A-201ENST00000408463 79 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 AL606517.2-201ENST00000442855 241 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 AL360271.2-201ENST00000447710 161 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.03□□□□□ -2.4
CCDC115Q96NT0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.03□□□□□ -2.4
CCDC115Q96NT0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 ADI1P3-201ENST00000549509 470 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
CCDC115Q96NT0 MIR5697-201ENST00000578045 78 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 AC011195.1-201ENST00000578177 177 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.03□□□□□ -2.4
CCDC115Q96NT0 AC091925.1-201ENST00000623204 462 ntBASIC0.03□□□□□ -2.4
CCDC115Q96NT0 MIR330-201ENST00000362196 94 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 RNU6-545P-201ENST00000362681 104 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 RNU6-199P-201ENST00000362954 107 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 RNU6-560P-201ENST00000364007 108 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 RNU6-224P-201ENST00000384055 107 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 RNU6-793P-201ENST00000384233 104 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 RNU6-378P-201ENST00000384324 107 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 SNORA26.3-201ENST00000391119 136 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AL031779.1-201ENST00000415663 330 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 USP9YP21-201ENST00000420603 432 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AC006366.1-201ENST00000422002 759 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.02□□□□□ -2.41
CCDC115Q96NT0 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AC245047.8-201ENST00000456455 284 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AP003327.1-201ENST00000529684 127 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AC090517.1-201ENST00000569307 266 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AC005730.3-201ENST00000583067 366 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AP002782.1-201ENST00000623107 614 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 AC100810.6-201ENST00000638068 285 ntBASIC0.02□□□□□ -2.41
CCDC115Q96NT0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.01□□□□□ -2.41
CCDC115Q96NT0 RNU6-769P-201ENST00000384407 104 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 AL356583.2-201ENST00000426536 280 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 TIMM9P3-201ENST00000428659 274 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 RPL23AP50-201ENST00000434149 455 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 AL117351.1-201ENST00000438864 766 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.01□□□□□ -2.41
CCDC115Q96NT0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.01□□□□□ -2.41
CCDC115Q96NT0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.01□□□□□ -2.41
CCDC115Q96NT0 CYCTP-201ENST00000504253 315 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 AC027419.1-201ENST00000522976 328 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 MTATP6P2-201ENST00000603319 678 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 BCRP9-201ENST00000605312 388 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 AL136317.1-201ENST00000612653 226 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 AC073349.3-201ENST00000617616 186 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.01□□□□□ -2.41
CCDC115Q96NT0 MIR8054-201ENST00000620877 86 ntBASIC0.01□□□□□ -2.41
CCDC115Q96NT0 SNORD114-26-201ENST00000363543 72 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 Y_RNA.192-201ENST00000363977 102 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 RNU6-417P-201ENST00000384712 107 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 RNA5SP504-201ENST00000410676 117 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 AL358176.2-201ENST00000425769 204 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0□□□□□ -2.41
CCDC115Q96NT0 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0□□□□□ -2.41
CCDC115Q96NT0 RNU6-948P-201ENST00000516374 107 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 RNU6-567P-201ENST00000516746 107 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0□□□□□ -2.41
CCDC115Q96NT0 AC009712.1-201ENST00000564938 316 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0□□□□□ -2.41
CCDC115Q96NT0 RNU6-88P-201ENST00000606801 100 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 MIR8087-201ENST00000612745 78 ntBASIC0□□□□□ -2.41
CCDC115Q96NT0 RNU4-41P-201ENST00000364426 143 ntBASIC-0.01□□□□□ -2.41
CCDC115Q96NT0 MIR140-201ENST00000385282 100 ntBASIC-0.01□□□□□ -2.41
CCDC115Q96NT0 RNA5SP467-201ENST00000391274 118 ntBASIC-0.01□□□□□ -2.41
CCDC115Q96NT0 MIR1283-1-201ENST00000408494 87 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms