Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 MIR208B-201ENST00000401172 77 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 AC007395.1-201ENST00000451333 677 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 RNU7-138P-201ENST00000459479 64 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 AL163973.1-201ENST00000484753 577 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 CCDC34P1-201ENST00000507441 517 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 Y_RNA.695-201ENST00000516715 107 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 MTND4P7-201ENST00000523876 130 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 AC103810.9-201ENST00000606688 112 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 HULC.1-201ENST00000612720 240 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 AC068205.3-201ENST00000636385 468 ntBASIC1.3□□□□□ -2.2
PKNOX2Q96KN3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 RPL21P111-201ENST00000418453 477 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AL591704.2-201ENST00000421658 181 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AC073464.1-201ENST00000429823 534 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 MTCO2P18-201ENST00000457151 658 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 BET1P1-201ENST00000482276 359 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 RPS23P5-201ENST00000495419 428 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 SNORD60.2-201ENST00000516883 86 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AC090517.1-201ENST00000569307 266 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 MIR4424-201ENST00000585257 86 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AC004223.2-201ENST00000590309 544 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AC004492.1-201ENST00000607036 742 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AL158063.1-201ENST00000615349 536 ntBASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.29□□□□□ -2.2
PKNOX2Q96KN3 AL159152.1-201ENST00000635019 2587 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 SNORA75-201ENST00000384158 137 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 SNORD73A-201ENST00000386062 65 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 RNA5SP219-201ENST00000390940 113 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 RNU6-1158P-201ENST00000391167 107 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 MTCO1P21-201ENST00000416634 589 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 MTCO2P19-201ENST00000427513 598 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 C8orf59P1-201ENST00000429930 303 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC099677.2-201ENST00000436385 175 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC010531.2-201ENST00000465012 153 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 RPL9P9-202ENST00000466501 579 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 SNORA14.1-201ENST00000516113 141 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC016256.1-201ENST00000547971 354 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 MIR4653-201ENST00000585107 83 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC087683.1-201ENST00000591187 441 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 VN1R80P-201ENST00000597126 338 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC083806.3-201ENST00000614016 455 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AC008147.4-201ENST00000617570 1204 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 AL354950.2-201ENST00000617939 290 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
PKNOX2Q96KN3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
PKNOX2Q96KN3 AC245060.5-201ENST00000610778 3293 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 MTND5P35-201ENST00000557537 1720 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 RNU1-36P-201ENST00000365130 165 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 AL606923.1-201ENST00000406616 190 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 AC114982.1-201ENST00000469402 321 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 AL163195.1-201ENST00000496941 348 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 RNU6-612P-201ENST00000516909 102 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 AC069114.2-201ENST00000604699 304 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 AP000770.2-201ENST00000623694 100 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 AC009541.1-201ENST00000438279 2662 ntBASIC1.27□□□□□ -2.21
PKNOX2Q96KN3 MIR520A-201ENST00000384862 85 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 MIR513A1-201ENST00000385138 129 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 AL353193.1-201ENST00000421444 268 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 USP9YP28-201ENST00000435142 589 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 RNU6-956P-201ENST00000458868 103 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 AC108078.1-201ENST00000508073 725 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 RPL39P5-202ENST00000512505 151 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms