Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU1-78P-201ENST00000391248 165 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.34□□□□□ -2.19
USP47Q96K76 RPS27AP8-201ENST00000452665 445 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.34□□□□□ -2.19
USP47Q96K76 AC087477.1-201ENST00000465747 340 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 GMFBP1-201ENST00000467831 427 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 AC016632.1-201ENST00000503994 196 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.34□□□□□ -2.19
USP47Q96K76 RNU5F-4P-201ENST00000516581 114 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.34□□□□□ -2.19
USP47Q96K76 EIF4A1P12-201ENST00000551910 141 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.34□□□□□ -2.19
USP47Q96K76 MTATP6P24-201ENST00000576835 677 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.34□□□□□ -2.19
USP47Q96K76 AC005730.3-201ENST00000583067 366 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 AC025449.1-201ENST00000603896 529 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 AP001485.1-201ENST00000604799 199 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
USP47Q96K76 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.34□□□□□ -2.19
USP47Q96K76 MTND5P9-201ENST00000503854 1755 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
USP47Q96K76 AL390237.1-201ENST00000404226 1415 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 RNU6-414P-201ENST00000363705 104 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 RNU6-296P-201ENST00000384608 107 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 RNU6-606P-201ENST00000384721 111 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 RNU6-1105P-201ENST00000384774 107 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
USP47Q96K76 RNU2-29P-201ENST00000410423 189 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 MTCO2P34-201ENST00000421994 607 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 RPL23AP95-201ENST00000426806 265 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 MTCO1P44-201ENST00000441935 243 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.34□□□□□ -2.2
USP47Q96K76 RPL31P3-201ENST00000458430 332 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 AC008628.2-201ENST00000502605 298 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 AC105417.1-201ENST00000514691 285 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.34□□□□□ -2.2
USP47Q96K76 AC021231.3-201ENST00000558497 370 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 MTCO3P23-201ENST00000561363 289 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 MIR3913-1-201ENST00000577744 102 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 AC103810.9-201ENST00000606688 112 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
USP47Q96K76 AL450472.1-202ENST00000637286 180 ntBASIC1.34□□□□□ -2.2
USP47Q96K76 RNU6-271P-201ENST00000363858 105 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 RNU1-133P-201ENST00000364867 167 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 SNORD31B-201ENST00000364977 69 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 SNORA36A-201ENST00000384221 132 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 SNORA26.3-201ENST00000391119 136 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.33□□□□□ -2.2
USP47Q96K76 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.33□□□□□ -2.2
USP47Q96K76 AC132479.1-201ENST00000449160 144 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.33□□□□□ -2.2
USP47Q96K76 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.33□□□□□ -2.2
USP47Q96K76 SUMO2P18-201ENST00000518873 252 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.33□□□□□ -2.2
USP47Q96K76 HMGB1P33-201ENST00000563485 527 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.33□□□□□ -2.2
USP47Q96K76 CYP4A27P-201ENST00000567218 190 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 SNORA77B-201ENST00000578179 125 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 Z98751.3-201ENST00000604447 521 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 AP001836.1-201ENST00000604675 523 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 RNU6-85P-201ENST00000605989 107 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 AC008536.2-201ENST00000607284 349 ntBASIC1.33□□□□□ -2.2
USP47Q96K76 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 AL159152.1-201ENST00000635019 2587 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
USP47Q96K76 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.32□□□□□ -2.2
USP47Q96K76 Y_RNA.399-201ENST00000383955 105 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 MIR532-201ENST00000385025 91 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 RNU6-903P-201ENST00000391270 109 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 MIR1267-201ENST00000408723 78 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.32□□□□□ -2.2
USP47Q96K76 AL445305.1-201ENST00000432577 575 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.32□□□□□ -2.2
USP47Q96K76 AC007547.1-201ENST00000462177 490 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 RPL9P9-202ENST00000466501 579 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.32□□□□□ -2.2
USP47Q96K76 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.32□□□□□ -2.2
USP47Q96K76 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.32□□□□□ -2.2
USP47Q96K76 AC098862.1-201ENST00000504991 413 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.32□□□□□ -2.2
USP47Q96K76 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.32□□□□□ -2.2
USP47Q96K76 AC069113.1-201ENST00000517763 267 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.32□□□□□ -2.2
USP47Q96K76 SUB1P2-201ENST00000556401 297 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 CYP3A137P-201ENST00000562436 69 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.32□□□□□ -2.2
USP47Q96K76 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.32□□□□□ -2.2
USP47Q96K76 MIR4422-201ENST00000581938 83 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 RN7SL793P-201ENST00000583259 296 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 AC087683.2-201ENST00000611384 326 ntBASIC1.32□□□□□ -2.2
USP47Q96K76 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
USP47Q96K76 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
USP47Q96K76 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
USP47Q96K76 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.31□□□□□ -2.2
USP47Q96K76 RNU6-862P-201ENST00000362804 105 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.31□□□□□ -2.2
USP47Q96K76 AL358934.1-201ENST00000432346 324 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 UBE2V1P8-201ENST00000437166 265 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms